Variant report

Variant rs1897114
Chromosome Location chr2:56066109-56066110
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:45 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:56064000-56067200 Enhancers Stomach Mucosa stomach
2 chr2:56064200-56069400 Enhancers Breast Myoepithelial Primary Cells Breast
3 chr2:56064600-56066200 Weak transcription HUES48 Cell Line embryonic stem cell
4 chr2:56064600-56067200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
5 chr2:56064800-56066600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
6 chr2:56064800-56067400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
7 chr2:56064800-56068800 Weak transcription Gastric stomach
8 chr2:56064800-56070200 Weak transcription K562 blood
9 chr2:56065000-56066400 Weak transcription Placenta Placenta
10 chr2:56065000-56066600 Weak transcription Pancreas Pancrea
11 chr2:56065600-56067400 Enhancers Fetal Lung lung
12 chr2:56065800-56066200 Enhancers Pancreatic Islets Pancreatic Islet
13 chr2:56065800-56066200 Flanking Active TSS A549 lung
14 chr2:56065800-56066400 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
15 chr2:56065800-56066400 Enhancers iPS-20b Cell Line embryonic stem cell
16 chr2:56065800-56066800 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
17 chr2:56065800-56067000 Enhancers Fetal Intestine Large intestine
18 chr2:56065800-56067400 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
19 chr2:56065800-56067400 Enhancers Muscle Satellite Cultured Cells --
20 chr2:56065800-56067400 Enhancers Hela-S3 cervix
21 chr2:56065800-56067400 Enhancers HSMM muscle
22 chr2:56065800-56067600 Enhancers ES-I3 Cell Line embryonic stem cell
23 chr2:56065800-56067600 Enhancers HSMMtube muscle
24 chr2:56066000-56066400 Enhancers HUES6 Cell Line embryonic stem cell
25 chr2:56066000-56066400 Enhancers iPS-18 Cell Line embryonic stem cell
26 chr2:56066000-56066400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
27 chr2:56066000-56066600 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
28 chr2:56066000-56066600 Enhancers Brain Anterior Caudate brain
29 chr2:56066000-56066600 Enhancers Small Intestine intestine
30 chr2:56066000-56066800 Enhancers H1 Cell Line embryonic stem cell
31 chr2:56066000-56066800 Flanking Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
32 chr2:56066000-56066800 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
33 chr2:56066000-56066800 Enhancers Liver Liver
34 chr2:56066000-56066800 Flanking Active TSS HepG2 liver
35 chr2:56066000-56067200 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
36 chr2:56066000-56067200 Enhancers Fetal Intestine Small intestine
37 chr2:56066000-56067200 Flanking Active TSS HMEC breast
38 chr2:56066000-56067400 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
39 chr2:56066000-56067400 Enhancers HUES64 Cell Line embryonic stem cell
40 chr2:56066000-56067400 Enhancers iPS-15b Cell Line embryonic stem cell
41 chr2:56066000-56067400 Enhancers Fetal Kidney kidney
42 chr2:56066000-56067400 Enhancers Rectal Mucosa Donor 31 rectum
43 chr2:56066000-56067400 Flanking Active TSS NHEK skin
44 chr2:56066000-56067600 Enhancers H9 Cell Line embryonic stem cell
45 chr2:56066000-56067600 Enhancers IMR90 fetal lung fibroblasts Cell Line lung

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