Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr3:142407159..142409366-chr3:142410995..142412632,2	K562	blood:

Variant related genes	Relation type
ENSG00000120756	Chromatin interaction

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv932989	chr3:142204208-142423305	Weak transcription Strong transcription Active TSS Flanking Active TSS Enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	33 gene(s)	inside rSNPs	diseases
2	nsv591920	chr3:142411200-142496951	Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Weak transcription Strong transcription Active TSS Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region miRNA target site	8 gene(s)	inside rSNPs	diseases
3	nsv521098	chr3:142411200-142503605	Weak transcription Active TSS Enhancers Bivalent/Poised TSS ZNF genes & repeats Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region miRNA target site	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:20 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:142366000-142435400	Weak transcription	Colonic Mucosa	Colon
2	chr3:142379200-142413000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
3	chr3:142385800-142415400	Weak transcription	A549	lung
4	chr3:142386400-142411800	Weak transcription	NHEK	skin
5	chr3:142387400-142413400	Weak transcription	Stomach Mucosa	stomach
6	chr3:142389200-142412400	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
7	chr3:142389200-142414800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
8	chr3:142389800-142442400	Weak transcription	iPS-20b Cell Line	embryonic stem cell
9	chr3:142392800-142418000	Weak transcription	HepG2	liver
10	chr3:142392800-142425400	Weak transcription	Dnd41	blood
11	chr3:142392800-142433000	Weak transcription	Sigmoid Colon	Sigmoid Colon
12	chr3:142393000-142426000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
13	chr3:142393400-142426200	Weak transcription	Primary hematopoietic stem cells	blood
14	chr3:142403000-142412800	Strong transcription	Rectal Mucosa Donor 31	rectum
15	chr3:142404200-142418000	Weak transcription	HMEC	breast
16	chr3:142404600-142416200	Weak transcription	Fetal Intestine Small	intestine
17	chr3:142407200-142417000	Weak transcription	HUES48 Cell Line	embryonic stem cell
18	chr3:142408800-142412000	Weak transcription	Duodenum Mucosa	Duodenum
19	chr3:142408800-142430400	Weak transcription	Liver	Liver
20	chr3:142410600-142412200	Weak transcription	Rectal Mucosa Donor 29	rectum

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