Variant report

Variant	rs191001842
Chromosome Location	chr14:70368494-70368495
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr14:70362229..70364883-chr14:70366768..70368731,2	MCF-7	breast:

Extended variants
information (count: 4 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv456336	chr14:70081956-70574149	Enhancers Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Strong transcription Active TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	75 gene(s)	inside rSNPs	diseases
2	nsv565007	chr14:70081956-70574149	Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Enhancers Strong transcription Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	75 gene(s)	inside rSNPs	diseases
3	nsv832824	chr14:70320639-70511401	Enhancers Weak transcription Strong transcription Genic enhancers Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	11 gene(s)	inside rSNPs	diseases
4	esv3366863	chr14:70368278-70368655	Weak transcription Enhancers Genic enhancers Strong transcription ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:34 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:70358400-70369400	ZNF genes & repeats	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr14:70364000-70370600	Weak transcription	HepG2	liver
3	chr14:70364000-70387600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
4	chr14:70365600-70368800	Genic enhancers	Hela-S3	cervix
5	chr14:70366800-70368800	Enhancers	Liver	Liver
6	chr14:70367000-70368600	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
7	chr14:70367000-70369600	Strong transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
8	chr14:70367200-70368800	Enhancers	NHEK	skin
9	chr14:70367200-70369000	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
10	chr14:70367200-70369200	Enhancers	Cortex derived primary cultured neurospheres	brain
11	chr14:70367400-70368600	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
12	chr14:70367400-70368800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
13	chr14:70367400-70368800	Enhancers	Breast Myoepithelial Primary Cells	Breast
14	chr14:70367400-70368800	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
15	chr14:70367400-70368800	Enhancers	Osteobl	bone
16	chr14:70367400-70369000	Enhancers	HUVEC	blood vessel
17	chr14:70367400-70369200	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
18	chr14:70367400-70369200	Enhancers	HMEC	breast
19	chr14:70367600-70368600	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
20	chr14:70367600-70369000	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
21	chr14:70367600-70369000	Enhancers	Adipose Nuclei	Adipose
22	chr14:70367600-70370600	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
23	chr14:70367800-70368600	Enhancers	Fetal Stomach	stomach
24	chr14:70367800-70368800	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
25	chr14:70367800-70369000	Enhancers	Brain Hippocampus Middle	brain
26	chr14:70367800-70369200	Enhancers	Brain Substantia Nigra	brain
27	chr14:70367800-70369200	Enhancers	HSMMtube	muscle
28	chr14:70368000-70368800	Enhancers	Brain Angular Gyrus	brain
29	chr14:70368000-70368800	Enhancers	Brain Inferior Temporal Lobe	brain
30	chr14:70368000-70369000	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
31	chr14:70368000-70369200	Enhancers	Brain Cingulate Gyrus	brain
32	chr14:70368400-70368600	Enhancers	A549	lung
33	chr14:70368400-70368800	ZNF genes & repeats	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
34	chr14:70368400-70368800	Enhancers	Fetal Muscle Leg	muscle

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