Variant report

Variant	rs1910060
Chromosome Location	chr5:91927612-91927613
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 23 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs10064328	1.00[EUR][1000 genomes]
rs10077094	1.00[EUR][1000 genomes]
rs10077943	1.00[EUR][1000 genomes]
rs10079736	1.00[EUR][1000 genomes]
rs10476525	1.00[EUR][1000 genomes]
rs12171504	1.00[EUR][1000 genomes]
rs12171509	1.00[EUR][1000 genomes]
rs13354460	1.00[EUR][1000 genomes]
rs13436000	1.00[EUR][1000 genomes]
rs13436230	1.00[EUR][1000 genomes]
rs17082132	1.00[EUR][1000 genomes]
rs55867531	1.00[EUR][1000 genomes]
rs56069666	1.00[EUR][1000 genomes]
rs56213708	1.00[EUR][1000 genomes]
rs58984559	1.00[EUR][1000 genomes]
rs60867003	1.00[EUR][1000 genomes]
rs6861650	1.00[EUR][1000 genomes]
rs6867083	1.00[EUR][1000 genomes]
rs6892010	1.00[EUR][1000 genomes]
rs73773974	1.00[EUR][1000 genomes]
rs73773983	1.00[EUR][1000 genomes]
rs9314098	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1015770	chr5:91911877-92498264	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent/Poised TSS ZNF genes & repeats Genic enhancers Strong transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:91927600-91928600	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links