The 2.0 version of rSNPBase

Variant report

Variant rs1947083
Chromosome Location chr1:67004801-67004802
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:47 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:67000000-67005000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
2 chr1:67000000-67005400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
3 chr1:67000200-67006400 Weak transcription H9 Cell Line embryonic stem cell
4 chr1:67000400-67005000 Weak transcription Breast Myoepithelial Primary Cells Breast
5 chr1:67000400-67005200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
6 chr1:67000400-67008000 Weak transcription Lung lung
7 chr1:67000400-67022000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
8 chr1:67000800-67029800 Weak transcription Primary hematopoietic stem cells blood
9 chr1:67001000-67006200 Weak transcription HepG2 liver
10 chr1:67001000-67008000 Weak transcription Left Ventricle heart
11 chr1:67001200-67022000 Weak transcription Right Ventricle heart
12 chr1:67001400-67005400 Weak transcription Fetal Lung lung
13 chr1:67001600-67011000 Weak transcription Stomach Smooth Muscle stomach
14 chr1:67001800-67006000 Weak transcription Cortex derived primary cultured neurospheres brain
15 chr1:67002000-67005600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
16 chr1:67002000-67010600 Weak transcription Pancreatic Islets Pancreatic Islet
17 chr1:67002200-67006400 Weak transcription Osteobl bone
18 chr1:67002600-67006000 Weak transcription HUVEC blood vessel
19 chr1:67002600-67006400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
20 chr1:67002800-67005000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
21 chr1:67002800-67005200 Weak transcription NH-A brain
22 chr1:67002800-67008200 Weak transcription Duodenum Smooth Muscle Duodenum
23 chr1:67003000-67006200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
24 chr1:67003000-67012400 Enhancers Brain Hippocampus Middle brain
25 chr1:67003200-67005400 Weak transcription Fetal Brain Female brain
26 chr1:67003600-67005000 Weak transcription Brain Inferior Temporal Lobe brain
27 chr1:67003800-67005000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
28 chr1:67003800-67008000 Enhancers Brain Anterior Caudate brain
29 chr1:67004200-67009200 Enhancers Brain Cingulate Gyrus brain
30 chr1:67004200-67009600 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
31 chr1:67004200-67012200 Enhancers NHDF-Ad bronchial
32 chr1:67004200-67012400 Enhancers Fetal Heart heart
33 chr1:67004400-67005000 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
34 chr1:67004400-67005000 Enhancers Brain Angular Gyrus brain
35 chr1:67004400-67005400 Enhancers NHLF lung
36 chr1:67004400-67006600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
37 chr1:67004800-67005000 Genic enhancers IMR90 fetal lung fibroblasts Cell Line lung
38 chr1:67004800-67005000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
39 chr1:67004800-67005400 Enhancers Muscle Satellite Cultured Cells --
40 chr1:67004800-67005600 Enhancers Aorta Aorta
41 chr1:67004800-67005600 Enhancers HMEC breast
42 chr1:67004800-67006000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
43 chr1:67004800-67006000 Weak transcription Fetal Brain Male brain
44 chr1:67004800-67006600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
45 chr1:67004800-67006800 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
46 chr1:67004800-67006800 Enhancers NHEK skin
47 chr1:67004800-67012400 Enhancers Brain Substantia Nigra brain

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Last update: Aug 31, 2015