Variant report

Variant	rs1953809
Chromosome Location	chr1:220614557-220614558
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 12 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs12046244	0.90[JPT][hapmap]
rs1338763	0.90[AMR][1000 genomes];0.95[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs1338764	0.90[AMR][1000 genomes];0.95[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs1338765	0.87[AFR][1000 genomes];0.97[AMR][1000 genomes];0.94[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs3753873	0.83[JPT][hapmap]
rs3753874	0.82[JPT][hapmap]
rs4120669	0.81[JPT][hapmap]
rs60224244	0.90[AMR][1000 genomes];0.95[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs61354864	0.88[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs6694188	0.85[AMR][1000 genomes];0.83[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs7555225	0.90[JPT][hapmap]
rs9430949	0.80[JPT][hapmap]

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:220610000-220624000	Weak transcription	Fetal Heart	heart
2	chr1:220614200-220614800	Enhancers	Fetal Muscle Leg	muscle

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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