Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:50589316..50590909-chr10:50591054..50594050,2	K562	blood:

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs10732632	0.86[EUR][1000 genomes]
rs10745260	0.86[EUR][1000 genomes]
rs1570645	0.93[YRI][hapmap];0.99[AFR][1000 genomes];0.93[AMR][1000 genomes]
rs17009940	1.00[EUR][1000 genomes]
rs17009941	1.00[EUR][1000 genomes]
rs17009956	1.00[EUR][1000 genomes]
rs17009957	1.00[EUR][1000 genomes]
rs17009961	1.00[EUR][1000 genomes]
rs17010002	0.84[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2889781	1.00[EUR][1000 genomes]
rs2889783	1.00[EUR][1000 genomes]
rs4562729	1.00[EUR][1000 genomes]
rs58651064	1.00[EUR][1000 genomes]
rs58733378	1.00[EUR][1000 genomes]
rs59096752	1.00[EUR][1000 genomes]
rs59572955	1.00[EUR][1000 genomes]
rs59959035	1.00[EUR][1000 genomes]
rs60811583	1.00[EUR][1000 genomes]
rs61296942	0.86[EUR][1000 genomes]
rs7900263	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7915692	0.80[YRI][hapmap]
rs7916121	0.83[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv895375	chr10:50306386-51028871	Weak transcription Active TSS Strong transcription Enhancers Flanking Active TSS Bivalent Enhancer Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	33 gene(s)	inside rSNPs	diseases
2	nsv534410	chr10:50317458-50826916	Weak transcription Bivalent Enhancer Enhancers Active TSS Strong transcription Flanking Active TSS Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	30 gene(s)	inside rSNPs	diseases
3	nsv895377	chr10:50588990-50678212	ZNF genes & repeats Bivalent Enhancer Active TSS Weak transcription Enhancers Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:50591600-50594800	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell

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