Variant report
| Variant | rs1980824 |
|---|---|
| Chromosome Location | chr20:24487255-24487256 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr20:24471200-24493600 | Weak transcription | Fetal Brain Female | brain |
| 2 | chr20:24475600-24495600 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 3 | chr20:24479000-24488400 | Weak transcription | Fetal Intestine Small | intestine |
| 4 | chr20:24481600-24504200 | Weak transcription | Fetal Brain Male | brain |
| 5 | chr20:24482000-24488600 | Enhancers | Left Ventricle | heart |
| 6 | chr20:24483000-24487600 | Weak transcription | Right Atrium | heart |
| 7 | chr20:24483800-24488600 | Enhancers | Brain Anterior Caudate | brain |
| 8 | chr20:24484000-24490000 | Enhancers | Fetal Heart | heart |
| 9 | chr20:24484000-24493000 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 10 | chr20:24484600-24487800 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 11 | chr20:24484600-24490600 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 12 | chr20:24485000-24487800 | Weak transcription | Fetal Intestine Large | intestine |
| 13 | chr20:24485800-24487800 | Weak transcription | Brain Substantia Nigra | brain |
| 14 | chr20:24486200-24488800 | Enhancers | Fetal Thymus | thymus |
| 15 | chr20:24486800-24488800 | Enhancers | Primary hematopoietic stem cells short term culture | blood |
| 16 | chr20:24486800-24488800 | Enhancers | Thymus | Thymus |
| 17 | chr20:24487000-24487400 | Weak transcription | Brain Angular Gyrus | brain |
| 18 | chr20:24487000-24487400 | Weak transcription | Brain Hippocampus Middle | brain |
| 19 | chr20:24487000-24488400 | Enhancers | Right Ventricle | heart |
| 20 | chr20:24487000-24488800 | Enhancers | HMEC | breast |
| 21 | chr20:24487200-24487400 | Enhancers | Brain Dorsolateral Prefrontal Cortex | brain |
| 22 | chr20:24487200-24487600 | Weak transcription | Brain Cingulate Gyrus | brain |
| 23 | chr20:24487200-24488600 | Enhancers | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 24 | chr20:24487200-24488600 | Enhancers | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 25 | chr20:24487200-24488600 | Enhancers | Brain Inferior Temporal Lobe | brain |
