The 2.0 version of rSNPBase

Variant report

Variant rs1991470
Chromosome Location chr5:16556521-16556522
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:36 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:16522400-16567400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
2 chr5:16542600-16567200 Weak transcription Primary T cells fromperipheralblood blood
3 chr5:16543200-16591600 Weak transcription Primary T killer naive cells fromperipheralblood blood
4 chr5:16543600-16589800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
5 chr5:16544000-16562400 Weak transcription Primary T helper cells fromperipheralblood blood
6 chr5:16544200-16565200 Weak transcription Primary T helper cells PMA-I stimulated --
7 chr5:16545000-16574600 Weak transcription Primary T helper naive cells from peripheral blood blood
8 chr5:16546200-16559400 Weak transcription iPS-15b Cell Line embryonic stem cell
9 chr5:16549200-16569000 Weak transcription Left Ventricle heart
10 chr5:16549200-16580200 Weak transcription Gastric stomach
11 chr5:16550400-16556800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
12 chr5:16550400-16557400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
13 chr5:16552400-16559200 Weak transcription Primary T cells from cord blood blood
14 chr5:16553000-16568600 Weak transcription NHDF-Ad bronchial
15 chr5:16553000-16573400 Weak transcription Fetal Intestine Small intestine
16 chr5:16553200-16556800 Weak transcription Brain Angular Gyrus brain
17 chr5:16553200-16557200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
18 chr5:16553200-16562000 Weak transcription Primary T helper naive cells fromperipheralblood blood
19 chr5:16553200-16564600 Weak transcription Psoas Muscle Psoas
20 chr5:16553200-16564600 Weak transcription Thymus Thymus
21 chr5:16553400-16556600 Weak transcription Brain Substantia Nigra brain
22 chr5:16553400-16556800 Weak transcription Brain Cingulate Gyrus brain
23 chr5:16553400-16558200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
24 chr5:16553400-16559200 Weak transcription ES-I3 Cell Line embryonic stem cell
25 chr5:16553400-16559600 Weak transcription HUES48 Cell Line embryonic stem cell
26 chr5:16553400-16564200 Weak transcription Fetal Heart heart
27 chr5:16553400-16569600 Weak transcription Primary T regulatory cells fromperipheralblood blood
28 chr5:16553400-16572800 Weak transcription Rectal Mucosa Donor 29 rectum
29 chr5:16553600-16559200 Weak transcription HUES64 Cell Line embryonic stem cell
30 chr5:16554200-16556800 Weak transcription Brain Hippocampus Middle brain
31 chr5:16554400-16556600 Weak transcription Brain Inferior Temporal Lobe brain
32 chr5:16555200-16571400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
33 chr5:16555400-16556600 Enhancers Primary B cells from peripheral blood blood
34 chr5:16555600-16558200 Weak transcription Brain Anterior Caudate brain
35 chr5:16556400-16556600 Enhancers Fetal Thymus thymus
36 chr5:16556400-16569600 Weak transcription Primary B cells from cord blood blood

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Last update: Aug 31, 2015