Variant report

Variant	rs199771474
Chromosome Location	chr19:36880400-36880401
allele	-/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv833816	chr19:36824257-37034287	ZNF genes & repeats Active TSS Weak transcription Enhancers Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	29 gene(s)	inside rSNPs	diseases
2	nsv1066026	chr19:36878441-36947928	ZNF genes & repeats Active TSS Weak transcription Transcr. at gene 5' and 3' Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:17 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr19:36870600-36880400	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
2	chr19:36870600-36880600	Weak transcription	Ovary	ovary
3	chr19:36870800-36882400	Weak transcription	Brain Inferior Temporal Lobe	brain
4	chr19:36877000-36883000	Weak transcription	Brain Angular Gyrus	brain
5	chr19:36878200-36880400	Weak transcription	Dnd41	blood
6	chr19:36878200-36882800	Weak transcription	Fetal Heart	heart
7	chr19:36878400-36880400	Weak transcription	Brain Germinal Matrix	brain
8	chr19:36878400-36880600	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
9	chr19:36878600-36883000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
10	chr19:36880200-36880400	Weak transcription	Fetal Brain Male	brain
11	chr19:36880400-36881000	ZNF genes & repeats	Fetal Brain Male	brain
12	chr19:36880400-36881200	Strong transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
13	chr19:36880400-36881200	ZNF genes & repeats	Dnd41	blood
14	chr19:36880400-36887400	ZNF genes & repeats	Brain Germinal Matrix	brain
15	chr19:36880400-36892800	ZNF genes & repeats	Liver	Liver
16	chr19:36880400-36893200	ZNF genes & repeats	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
17	chr19:36880400-36904600	ZNF genes & repeats	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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