Variant report

Variant	rs200094516
Chromosome Location	chr16:80196904-80196905
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:13 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv833298	chr16:80122337-80314603	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Active TSS Bivalent/Poised TSS Strong transcription Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
2	nsv1055982	chr16:80151604-80202923	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Active TSS	Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
3	esv3509342	chr16:80196706-80197192	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
4	esv3509339	chr16:80196793-80197096	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
5	esv3509338	chr16:80196819-80197039	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
6	esv3313051	chr16:80196832-80197047	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
7	nsv471718	chr16:80196837-80197040	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
8	esv3509340	chr16:80196843-80197053	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
9	esv3365680	chr16:80196863-80197023	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
10	esv3313053	chr16:80196887-80197007	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
11	esv3509337	chr16:80196899-80197002	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
12	esv3313054	chr16:80196901-80197005	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
13	esv3509343	chr16:80196901-80197005	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr16:80186600-80197600	Weak transcription	HSMMtube	muscle
2	chr16:80192800-80197600	Weak transcription	Pancreas	Pancrea
3	chr16:80193200-80199600	Weak transcription	A549	lung
4	chr16:80193400-80197600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
5	chr16:80193400-80197800	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
6	chr16:80193400-80197800	Weak transcription	Osteobl	bone
7	chr16:80193400-80199200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
8	chr16:80193600-80197400	Weak transcription	HSMM	muscle
9	chr16:80193600-80197600	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
10	chr16:80193600-80197600	Weak transcription	NH-A	brain
11	chr16:80193600-80197800	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
12	chr16:80193600-80201400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
13	chr16:80193600-80207600	Weak transcription	Muscle Satellite Cultured Cells	--
14	chr16:80193800-80201400	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
15	chr16:80196200-80197000	Enhancers	Fetal Kidney	kidney

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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