Variant report

Variant	rs2005734
Chromosome Location	chr6:139745045-139745046
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 7 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:7)

rs_ID	r²[population]
rs1019237	0.93[AFR][1000 genomes];0.99[AMR][1000 genomes];0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2908495	0.81[AFR][1000 genomes];0.84[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs2908510	0.87[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs3010312	0.81[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs3010316	0.93[AFR][1000 genomes];0.99[AMR][1000 genomes];0.93[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs3095426	0.82[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs887780	0.91[AMR][1000 genomes];0.92[EUR][1000 genomes];0.89[ASN][1000 genomes]

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:139742400-139745600	Enhancers	Primary hematopoietic stem cells short term culture	blood
2	chr6:139743200-139745600	Enhancers	Primary monocytes fromperipheralblood	blood
3	chr6:139743600-139745200	Weak transcription	K562	blood
4	chr6:139743800-139745600	Weak transcription	Primary hematopoietic stem cells	blood
5	chr6:139743800-139754600	Weak transcription	Stomach Mucosa	stomach
6	chr6:139744000-139746400	Weak transcription	Skeletal Muscle Female	skeletal muscle
7	chr6:139744000-139747000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
8	chr6:139744200-139747200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
9	chr6:139744400-139748800	Weak transcription	Pancreas	Pancrea
10	chr6:139744800-139750400	Weak transcription	Monocytes-CD14+_RO01746	blood

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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