Variant report

Variant	rs201491
Chromosome Location	chr7:101753271-101753272
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr7:101743613..101746521-chr7:101753167..101754806,2	K562	blood:
2	chr7:101751781..101754172-chr7:101754915..101757443,3	K562	blood:
3	chr7:101743000..101745904-chr7:101750491..101753386,3	MCF-7	breast:
4	chr7:101752221..101755453-chr7:101756751..101759873,4	K562	blood:
5	chr7:101528909..101531849-chr7:101750472..101753335,2	MCF-7	breast:

rs_ID	r²[population]
rs169307	0.86[CEU][hapmap]
rs1902	0.93[CEU][hapmap]
rs201435	0.86[CEU][hapmap]
rs201441	0.85[CEU][hapmap]
rs201442	0.85[CEU][hapmap]
rs201443	0.86[CEU][hapmap]
rs201445	0.86[CEU][hapmap]
rs201447	0.85[CEU][hapmap]
rs201448	0.85[CEU][hapmap]
rs201449	0.85[CEU][hapmap]
rs201450	0.85[CEU][hapmap]
rs201454	0.86[CEU][hapmap]
rs201455	0.85[CEU][hapmap]
rs201456	0.86[CEU][hapmap]
rs201459	0.84[CEU][hapmap]
rs201468	0.89[CEU][hapmap]
rs201469	0.86[CEU][hapmap]
rs201475	0.86[CEU][hapmap]
rs201477	0.85[CEU][hapmap]
rs201483	0.97[AFR][1000 genomes];0.99[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs201490	0.86[CEU][hapmap]
rs201493	0.81[CEU][hapmap]
rs201498	0.85[CEU][hapmap]
rs201501	0.98[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs201502	0.85[CEU][hapmap]
rs201503	0.85[CEU][hapmap]
rs201509	0.85[CEU][hapmap]
rs201522	0.85[CEU][hapmap]
rs3764839	1.00[JPT][hapmap]
rs6950791	0.86[CEU][hapmap]

Chromatin state (count:121 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:101708200-101765000	Weak transcription	Small Intestine	intestine
2	chr7:101716400-101758600	Weak transcription	Primary T helper naive cells from peripheral blood	blood
3	chr7:101733200-101758600	Weak transcription	Psoas Muscle	Psoas
4	chr7:101737400-101754400	Weak transcription	Brain Angular Gyrus	brain
5	chr7:101738200-101754400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
6	chr7:101738400-101760800	Weak transcription	NHDF-Ad	bronchial
7	chr7:101738600-101758400	Weak transcription	Colon Smooth Muscle	Colon
8	chr7:101738600-101763600	Strong transcription	Monocytes-CD14+_RO01746	blood
9	chr7:101738800-101754400	Weak transcription	Brain Germinal Matrix	brain
10	chr7:101738800-101763800	Strong transcription	Primary neutrophils fromperipheralblood	blood
11	chr7:101738800-101764200	Strong transcription	Fetal Thymus	thymus
12	chr7:101739000-101760600	Weak transcription	NHLF	lung
13	chr7:101739200-101760600	Weak transcription	HSMM	muscle
14	chr7:101739200-101763400	Strong transcription	Primary monocytes fromperipheralblood	blood
15	chr7:101740400-101763400	Strong transcription	Dnd41	blood
16	chr7:101740400-101764000	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
17	chr7:101741000-101757200	Weak transcription	NH-A	brain
18	chr7:101741000-101765000	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
19	chr7:101741400-101754000	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
20	chr7:101741600-101764800	Weak transcription	Stomach Mucosa	stomach
21	chr7:101743600-101754400	Weak transcription	H9 Cell Line	embryonic stem cell
22	chr7:101744400-101754800	Strong transcription	Fetal Intestine Large	intestine
23	chr7:101744600-101765000	Weak transcription	HUVEC	blood vessel
24	chr7:101744800-101754000	Weak transcription	Brain Hippocampus Middle	brain
25	chr7:101745000-101758600	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
26	chr7:101745200-101754600	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
27	chr7:101745600-101754600	Weak transcription	HSMMtube	muscle
28	chr7:101745600-101758600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
29	chr7:101746000-101765000	Weak transcription	HMEC	breast
30	chr7:101746600-101758600	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
31	chr7:101746600-101764200	Strong transcription	Primary hematopoietic stem cells short term culture	blood
32	chr7:101746800-101754600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
33	chr7:101746800-101758000	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
34	chr7:101746800-101759200	Weak transcription	Colonic Mucosa	Colon
35	chr7:101747000-101754600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
36	chr7:101747800-101754200	Weak transcription	Brain Anterior Caudate	brain
37	chr7:101747800-101762800	Weak transcription	Fetal Kidney	kidney
38	chr7:101748000-101754200	Weak transcription	Brain Substantia Nigra	brain
39	chr7:101748600-101754000	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
40	chr7:101748600-101754400	Weak transcription	Brain Inferior Temporal Lobe	brain
41	chr7:101748600-101754800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
42	chr7:101748600-101756600	Weak transcription	Aorta	Aorta
43	chr7:101748600-101756800	Weak transcription	Rectal Mucosa Donor 31	rectum
44	chr7:101748600-101757800	Weak transcription	Primary T helper cells PMA-I stimulated	--
45	chr7:101748600-101758200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
46	chr7:101748600-101758600	Weak transcription	Muscle Satellite Cultured Cells	--
47	chr7:101748600-101765000	Weak transcription	NHEK	skin
48	chr7:101748800-101753800	Weak transcription	iPS-15b Cell Line	embryonic stem cell
49	chr7:101748800-101757200	Weak transcription	A549	lung
50	chr7:101748800-101758600	Weak transcription	K562	blood

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