Variant report
| Variant | rs2021403 |
|---|---|
| Chromosome Location | chr14:37387775-37387776 |
| allele | G/T |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:21)
| rs_ID | r2[population] |
|---|---|
| rs10131318 | 1.00[ASN][1000 genomes] |
| rs10146438 | 1.00[CHB][hapmap] |
| rs10149290 | 1.00[CHB][hapmap] |
| rs12878874 | 1.00[CHB][hapmap];1.00[ASN][1000 genomes] |
| rs12881110 | 1.00[CHB][hapmap] |
| rs12896722 | 1.00[CHB][hapmap] |
| rs1367031 | 1.00[CHB][hapmap] |
| rs17767143 | 1.00[CHB][hapmap];1.00[ASN][1000 genomes] |
| rs6571767 | 1.00[CHB][hapmap] |
| rs6571768 | 1.00[CHB][hapmap] |
| rs712390 | 1.00[CHB][hapmap] |
| rs712394 | 1.00[CHB][hapmap] |
| rs7143097 | 1.00[CHB][hapmap] |
| rs7147514 | 1.00[CHB][hapmap];1.00[ASN][1000 genomes] |
| rs7147556 | 1.00[CHB][hapmap];1.00[ASN][1000 genomes] |
| rs7159402 | 1.00[CHB][hapmap] |
| rs7159633 | 1.00[CHB][hapmap] |
| rs8017518 | 1.00[CHB][hapmap] |
| rs848697 | 1.00[CHB][hapmap] |
| rs848698 | 1.00[CHB][hapmap] |
| rs848699 | 1.00[CHB][hapmap] |
Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page:
1
| No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
|---|---|---|---|---|---|---|---|
| 1 | nsv1047290 | chr14:36564568-37445157 | Weak transcription Enhancers Bivalent/Poised TSS Strong transcription Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 43 gene(s) | inside rSNPs | diseases |
| 2 | nsv534288 | chr14:37254539-37697745 | Enhancers Active TSS Weak transcription Flanking Active TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Strong transcription Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 17 gene(s) | inside rSNPs | diseases |
| No data |
Chromatin state (count:0 , 50 per page) page:
| No data |
