Variant report

Variant rs202235145
Chromosome Location chr6:55039148-55039149
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:39 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:55038800-55039800 Active TSS Fetal Brain Female brain
2 chr6:55039000-55039200 Bivalent Enhancer H1 Derived Mesenchymal Stem Cells ES cell derived
3 chr6:55039000-55039200 Bivalent Enhancer H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr6:55039000-55039200 Bivalent/Poised TSS H9 Derived Neuron Cultured Cells ES cell derived
5 chr6:55039000-55039200 Bivalent Enhancer IMR90 fetal lung fibroblasts Cell Line lung
6 chr6:55039000-55039200 Active TSS iPS DF 19.11 Cell Line embryonic stem cell
7 chr6:55039000-55039200 Bivalent Enhancer Primary hematopoietic stem cells G-CSF-mobilized Male --
8 chr6:55039000-55039200 Bivalent Enhancer Foreskin Keratinocyte Primary Cells skin03 Skin
9 chr6:55039000-55039200 Bivalent/Poised TSS Brain Germinal Matrix brain
10 chr6:55039000-55039200 Active TSS Brain Hippocampus Middle brain
11 chr6:55039000-55039200 Active TSS Brain Inferior Temporal Lobe brain
12 chr6:55039000-55039200 Active TSS Brain Dorsolateral Prefrontal Cortex brain
13 chr6:55039000-55039200 Active TSS Brain Substantia Nigra brain
14 chr6:55039000-55039200 Enhancers Right Ventricle heart
15 chr6:55039000-55039400 Bivalent/Poised TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
16 chr6:55039000-55039400 Bivalent/Poised TSS Ganglion Eminence derived primary cultured neurospheres brain
17 chr6:55039000-55039400 Flanking Bivalent TSS/Enh Foreskin Keratinocyte Primary Cells skin02 Skin
18 chr6:55039000-55039400 Bivalent/Poised TSS Duodenum Smooth Muscle Duodenum
19 chr6:55039000-55039600 Bivalent Enhancer Primary hematopoietic stem cells blood
20 chr6:55039000-55039600 Flanking Bivalent TSS/Enh Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
21 chr6:55039000-55039600 Flanking Bivalent TSS/Enh Skeletal Muscle Male skeletal muscle
22 chr6:55039000-55039800 Bivalent/Poised TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
23 chr6:55039000-55039800 Bivalent/Poised TSS HUES6 Cell Line embryonic stem cell
24 chr6:55039000-55039800 Active TSS ES-UCSF4 Cell Line embryonic stem cell
25 chr6:55039000-55040000 Bivalent/Poised TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
26 chr6:55039000-55040000 Bivalent/Poised TSS HUES48 Cell Line embryonic stem cell
27 chr6:55039000-55040200 Bivalent/Poised TSS iPS-18 Cell Line embryonic stem cell
28 chr6:55039000-55040200 Bivalent/Poised TSS iPS DF 6.9 Cell Line embryonic stem cell
29 chr6:55039000-55040200 Enhancers Pancreas Pancrea
30 chr6:55039000-55040200 Active TSS Right Atrium heart
31 chr6:55039000-55040200 Bivalent/Poised TSS Stomach Smooth Muscle stomach
32 chr6:55039000-55040400 Bivalent/Poised TSS ES-WA7 Cell Line embryonic stem cell
33 chr6:55039000-55040400 Bivalent/Poised TSS iPS-20b Cell Line embryonic stem cell
34 chr6:55039000-55040600 Bivalent/Poised TSS ES-I3 Cell Line embryonic stem cell
35 chr6:55039000-55040600 Bivalent/Poised TSS H1 Cell Line embryonic stem cell
36 chr6:55039000-55040600 Bivalent/Poised TSS H9 Cell Line embryonic stem cell
37 chr6:55039000-55040600 Bivalent/Poised TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
38 chr6:55039000-55040800 Bivalent/Poised TSS HUES64 Cell Line embryonic stem cell
39 chr6:55039000-55040800 Bivalent/Poised TSS iPS-15b Cell Line embryonic stem cell

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