Variant report

Variant	rs2026150
Chromosome Location	chr9:72223674-72223675
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 32 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:32)

rs_ID	r²[population]
rs10123008	0.90[CHB][hapmap];1.00[JPT][hapmap];0.95[ASN][1000 genomes]
rs10746682	0.95[CEU][hapmap];0.84[CHB][hapmap];0.86[YRI][hapmap];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10780527	0.91[CEU][hapmap];0.84[CHB][hapmap];0.85[JPT][hapmap]
rs10780528	0.91[CEU][hapmap];0.84[CHB][hapmap];0.85[JPT][hapmap]
rs10780539	0.95[CEU][hapmap];0.92[CHB][hapmap];1.00[JPT][hapmap];0.95[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10867825	1.00[CEU][hapmap];0.86[CHB][hapmap];0.87[JPT][hapmap];0.87[YRI][hapmap];0.93[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs10867828	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10867830	0.91[CEU][hapmap];0.84[CHB][hapmap];0.93[JPT][hapmap];0.83[AMR][1000 genomes];0.92[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs11139338	0.84[CHB][hapmap];0.85[JPT][hapmap]
rs11139361	0.92[CHB][hapmap];0.85[JPT][hapmap]
rs11139511	0.95[CEU][hapmap];0.92[CHB][hapmap];0.92[JPT][hapmap];0.82[AMR][1000 genomes];0.89[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1330334	0.84[CHB][hapmap];0.93[JPT][hapmap]
rs1330336	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1411440	0.84[CHB][hapmap];0.93[JPT][hapmap];0.93[ASN][1000 genomes]
rs1556211	0.88[CEU][hapmap];0.84[CHB][hapmap];0.86[JPT][hapmap];0.95[YRI][hapmap]
rs1854702	0.92[CHB][hapmap];0.93[JPT][hapmap]
rs1854703	0.88[CEU][hapmap];0.84[CHB][hapmap];0.93[JPT][hapmap];1.00[YRI][hapmap];0.87[AFR][1000 genomes]
rs1967880	0.91[CEU][hapmap];0.84[CHB][hapmap];0.85[JPT][hapmap]
rs1970017	0.91[CEU][hapmap];0.84[CHB][hapmap];0.85[JPT][hapmap]
rs2161056	0.82[CEU][hapmap];0.92[JPT][hapmap];0.82[AMR][1000 genomes];0.87[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2309515	1.00[CEU][hapmap];0.92[CHB][hapmap];1.00[JPT][hapmap];0.95[YRI][hapmap];0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4744913	0.92[CEU][hapmap];0.84[CHB][hapmap];0.86[JPT][hapmap]
rs4744917	0.92[CHB][hapmap];0.93[JPT][hapmap]
rs4744918	0.86[AFR][1000 genomes]
rs4744919	1.00[CHB][hapmap];0.92[JPT][hapmap]
rs6559643	0.85[JPT][hapmap]
rs7030393	0.92[CHB][hapmap];0.93[JPT][hapmap]
rs7031694	0.87[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.84[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs7853783	0.84[CHB][hapmap];0.86[JPT][hapmap]
rs7871895	0.80[CHB][hapmap];0.86[JPT][hapmap]
rs986352	0.83[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.84[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs987653	0.95[CEU][hapmap];0.92[CHB][hapmap];1.00[JPT][hapmap];0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:72215600-72235200	Weak transcription	Aorta	Aorta
2	chr9:72219600-72226000	Weak transcription	Liver	Liver
3	chr9:72219800-72242600	Weak transcription	Left Ventricle	heart
4	chr9:72221200-72237200	Weak transcription	Ovary	ovary
5	chr9:72223600-72224800	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived

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