Variant report

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs10494930	1.00[CHB][hapmap];0.91[CHD][hapmap];0.83[GIH][hapmap];0.88[JPT][hapmap];0.93[ASN][1000 genomes]
rs12080732	0.81[ASW][hapmap]
rs12082952	1.00[CHB][hapmap];0.92[GIH][hapmap];0.83[LWK][hapmap];0.94[MKK][hapmap];0.92[TSI][hapmap];0.80[AFR][1000 genomes];0.81[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs12084848	0.81[LWK][hapmap];0.91[MKK][hapmap]
rs17017087	1.00[CHB][hapmap];1.00[CHD][hapmap];0.92[GIH][hapmap];1.00[JPT][hapmap];0.81[LWK][hapmap];0.94[MKK][hapmap];0.96[TSI][hapmap];0.82[AFR][1000 genomes];0.81[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs17017120	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.92[GIH][hapmap];1.00[JPT][hapmap];0.84[ASN][1000 genomes]
rs4951489	1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[ASN][1000 genomes]
rs4951684	0.86[CHB][hapmap];0.91[CHD][hapmap];0.86[JPT][hapmap];0.82[ASN][1000 genomes]
rs4951685	0.93[ASN][1000 genomes]
rs4951690	0.98[ASN][1000 genomes]
rs4951691	0.98[ASN][1000 genomes]
rs4951692	1.00[CHB][hapmap];1.00[JPT][hapmap];0.98[ASN][1000 genomes]
rs4951696	1.00[CHB][hapmap];1.00[JPT][hapmap];0.98[ASN][1000 genomes]
rs4951697	0.81[CHD][hapmap]
rs4951703	0.84[ASN][1000 genomes]
rs4951705	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.84[ASN][1000 genomes]
rs56919772	0.83[AFR][1000 genomes]
rs59431775	0.80[AFR][1000 genomes]
rs59797977	0.95[AFR][1000 genomes]
rs6671566	1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[ASN][1000 genomes]
rs7523925	0.93[YRI][hapmap]
rs7556549	0.85[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv524740	chr1:211143108-211155614	Enhancers Strong transcription Weak transcription	n/a	n/a	inside rSNPs	diseases
2	nsv524860	chr1:211152696-211155614	Enhancers Strong transcription Weak transcription	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:211152600-211169400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr1:211152800-211183400	Weak transcription	HSMMtube	muscle
3	chr1:211154200-211161800	Weak transcription	HSMM	muscle
4	chr1:211155400-211161200	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow

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