Variant report

Variant	rs2066024
Chromosome Location	chr1:211301191-211301192
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 16 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:16)

rs_ID	r²[population]
rs11119680	0.90[AMR][1000 genomes];0.99[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11119684	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11119690	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11119698	0.84[AMR][1000 genomes];0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12036302	1.00[AFR][1000 genomes];0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12119695	0.86[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1338351	1.00[AFR][1000 genomes];0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs1933523	0.93[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2066023	0.87[AMR][1000 genomes];0.99[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs3811395	0.90[AMR][1000 genomes];0.99[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs4512717	0.91[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs58722379	0.84[AMR][1000 genomes];0.95[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs6663683	0.84[AMR][1000 genomes];0.95[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs6703560	0.82[EUR][1000 genomes]
rs72741110	0.81[ASN][1000 genomes]
rs7525019	0.89[AFR][1000 genomes];0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:211292800-211305400	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
2	chr1:211297800-211305400	Weak transcription	Brain Hippocampus Middle	brain
3	chr1:211298800-211302000	Weak transcription	Brain Angular Gyrus	brain
4	chr1:211300400-211301200	Enhancers	Muscle Satellite Cultured Cells	--
5	chr1:211300400-211301200	Enhancers	Brain Anterior Caudate	brain
6	chr1:211300400-211301400	Genic enhancers	HSMM	muscle
7	chr1:211300600-211303200	Weak transcription	HSMMtube	muscle
8	chr1:211300800-211301200	Weak transcription	Brain Inferior Temporal Lobe	brain
9	chr1:211301000-211301200	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
10	chr1:211301000-211301200	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
11	chr1:211301000-211301200	Enhancers	Brain Cingulate Gyrus	brain
12	chr1:211301000-211301400	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
13	chr1:211301000-211306000	Weak transcription	A549	lung

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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