The 2.0 version of rSNPBase

Variant report

Variant rs2077606
Chromosome Location chr17:43529293-43529294
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:107 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:43510200-43548200 Weak transcription Pancreatic Islets Pancreatic Islet
2 chr17:43510400-43539200 Weak transcription Osteobl bone
3 chr17:43510800-43530000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr17:43510800-43567200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr17:43515400-43531200 Weak transcription Small Intestine intestine
6 chr17:43515600-43539200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
7 chr17:43515600-43549600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
8 chr17:43516800-43530400 Weak transcription Brain Germinal Matrix brain
9 chr17:43516800-43531200 Weak transcription Ovary ovary
10 chr17:43516800-43531800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
11 chr17:43517000-43531000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
12 chr17:43517000-43549800 Weak transcription Left Ventricle heart
13 chr17:43518000-43531800 Strong transcription Fetal Intestine Small intestine
14 chr17:43518000-43534000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
15 chr17:43518000-43552600 Weak transcription Cortex derived primary cultured neurospheres brain
16 chr17:43518200-43539000 Weak transcription A549 lung
17 chr17:43518200-43548600 Weak transcription Fetal Kidney kidney
18 chr17:43518200-43552200 Weak transcription Rectal Smooth Muscle rectum
19 chr17:43518400-43530000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
20 chr17:43518400-43530200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
21 chr17:43518400-43531800 Weak transcription H1 Cell Line embryonic stem cell
22 chr17:43518400-43538600 Weak transcription Hela-S3 cervix
23 chr17:43518400-43538800 Weak transcription ES-I3 Cell Line embryonic stem cell
24 chr17:43518400-43549600 Weak transcription HUES6 Cell Line embryonic stem cell
25 chr17:43519000-43530400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
26 chr17:43519400-43533000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
27 chr17:43519600-43564600 Weak transcription HSMMtube muscle
28 chr17:43523000-43530800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
29 chr17:43523000-43531000 Weak transcription Primary T helper naive cells fromperipheralblood blood
30 chr17:43523000-43533000 Weak transcription Duodenum Mucosa Duodenum
31 chr17:43523000-43567200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
32 chr17:43523800-43533800 Weak transcription Brain Angular Gyrus brain
33 chr17:43523800-43546400 Weak transcription Pancreas Pancrea
34 chr17:43523800-43560000 Weak transcription NHDF-Ad bronchial
35 chr17:43524000-43529600 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
36 chr17:43524000-43530200 Weak transcription Primary T helper cells PMA-I stimulated --
37 chr17:43524000-43539200 Weak transcription NH-A brain
38 chr17:43524400-43567000 Weak transcription Primary T killer memory cells from peripheral blood blood
39 chr17:43524800-43531000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
40 chr17:43525000-43530200 Weak transcription Gastric stomach
41 chr17:43525000-43531000 Weak transcription Primary hematopoietic stem cells short term culture blood
42 chr17:43525000-43539400 Weak transcription HSMM muscle
43 chr17:43525200-43530200 Weak transcription Placenta Placenta
44 chr17:43525200-43530600 Weak transcription Placenta Amnion Placenta Amnion
45 chr17:43525400-43530200 Weak transcription Rectal Mucosa Donor 29 rectum
46 chr17:43525400-43530400 Weak transcription Fetal Muscle Trunk muscle
47 chr17:43525400-43531000 Weak transcription Fetal Muscle Leg muscle
48 chr17:43525400-43533200 Weak transcription Muscle Satellite Cultured Cells --
49 chr17:43525400-43535800 Strong transcription Fetal Stomach stomach
50 chr17:43525800-43533800 Weak transcription HMEC breast

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Last update: Aug 31, 2015