The 2.0 version of rSNPBase

Variant report

Variant rs2079042
Chromosome Location chr11:17387403-17387404
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:74 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:17375400-17388800 Weak transcription Spleen Spleen
2 chr11:17375400-17389600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
3 chr11:17375400-17390200 Weak transcription Small Intestine intestine
4 chr11:17375600-17388400 Weak transcription Gastric stomach
5 chr11:17375600-17388600 Weak transcription Left Ventricle heart
6 chr11:17375600-17389000 Weak transcription Pancreas Pancrea
7 chr11:17375800-17387600 Weak transcription Aorta Aorta
8 chr11:17376000-17387600 Weak transcription Placenta Placenta
9 chr11:17376000-17387600 Weak transcription Ovary ovary
10 chr11:17376000-17387800 Weak transcription HSMMtube muscle
11 chr11:17376000-17388000 Weak transcription Colonic Mucosa Colon
12 chr11:17376000-17388200 Weak transcription Thymus Thymus
13 chr11:17376000-17388400 Weak transcription Rectal Smooth Muscle rectum
14 chr11:17376000-17388400 Weak transcription Stomach Smooth Muscle stomach
15 chr11:17376000-17389000 Weak transcription NHLF lung
16 chr11:17376000-17389800 Weak transcription Primary T cells fromperipheralblood blood
17 chr11:17376000-17389800 Weak transcription Muscle Satellite Cultured Cells --
18 chr11:17376000-17390000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
19 chr11:17376000-17391000 Weak transcription Right Ventricle heart
20 chr11:17376200-17390000 Weak transcription Fetal Brain Male brain
21 chr11:17376400-17390000 Weak transcription HUVEC blood vessel
22 chr11:17376400-17390600 Weak transcription Primary T helper cells PMA-I stimulated --
23 chr11:17376600-17387600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
24 chr11:17376600-17387800 Weak transcription NHDF-Ad bronchial
25 chr11:17376600-17388000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
26 chr11:17376600-17388000 Weak transcription Skeletal Muscle Male skeletal muscle
27 chr11:17376600-17388000 Weak transcription HMEC breast
28 chr11:17376600-17388400 Weak transcription Duodenum Smooth Muscle Duodenum
29 chr11:17376600-17389000 Weak transcription Brain Angular Gyrus brain
30 chr11:17376600-17391400 Weak transcription Brain Cingulate Gyrus brain
31 chr11:17376800-17388800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
32 chr11:17376800-17388800 Weak transcription Brain Anterior Caudate brain
33 chr11:17377800-17388400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
34 chr11:17378400-17388200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
35 chr11:17379600-17387600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
36 chr11:17380000-17388800 Weak transcription Sigmoid Colon Sigmoid Colon
37 chr11:17380200-17388000 Weak transcription Brain Inferior Temporal Lobe brain
38 chr11:17380200-17390200 Weak transcription Osteobl bone
39 chr11:17380800-17388600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
40 chr11:17381800-17387800 Weak transcription Pancreatic Islets Pancreatic Islet
41 chr11:17381800-17388800 Strong transcription HepG2 liver
42 chr11:17381800-17388800 Weak transcription NHEK skin
43 chr11:17382000-17387800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
44 chr11:17382400-17388000 Weak transcription Cortex derived primary cultured neurospheres brain
45 chr11:17382400-17388800 Weak transcription HSMM muscle
46 chr11:17382400-17401200 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
47 chr11:17382600-17388600 Weak transcription Colon Smooth Muscle Colon
48 chr11:17382600-17389000 Weak transcription Fetal Stomach stomach
49 chr11:17382800-17387600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
50 chr11:17385200-17389600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell

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Last update: Aug 31, 2015