Variant report

Variant rs2084342
Chromosome Location chr2:133540233-133540234
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:33 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:133523400-133544400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
2 chr2:133524200-133547800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
3 chr2:133527600-133544200 Weak transcription Left Ventricle heart
4 chr2:133528000-133541800 Weak transcription Fetal Muscle Trunk muscle
5 chr2:133529400-133540600 Weak transcription Rectal Mucosa Donor 29 rectum
6 chr2:133529400-133544400 Weak transcription Fetal Intestine Large intestine
7 chr2:133530800-133542600 Weak transcription Ovary ovary
8 chr2:133530800-133554400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr2:133531400-133561400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
10 chr2:133532600-133542000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
11 chr2:133533200-133547000 Weak transcription Fetal Intestine Small intestine
12 chr2:133537000-133542600 Weak transcription Fetal Brain Male brain
13 chr2:133537200-133540400 Weak transcription Fetal Brain Female brain
14 chr2:133538200-133540600 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
15 chr2:133538200-133543800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
16 chr2:133538200-133561200 Weak transcription Hela-S3 cervix
17 chr2:133538400-133543200 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
18 chr2:133538800-133541600 Weak transcription Fetal Muscle Leg muscle
19 chr2:133538800-133553800 Weak transcription Right Ventricle heart
20 chr2:133539400-133540400 Enhancers Cortex derived primary cultured neurospheres brain
21 chr2:133539400-133540600 Enhancers Brain Cingulate Gyrus brain
22 chr2:133539400-133541000 Strong transcription Breast Myoepithelial Primary Cells Breast
23 chr2:133539800-133540800 Enhancers Brain Hippocampus Middle brain
24 chr2:133539800-133541200 Enhancers Brain Substantia Nigra brain
25 chr2:133539800-133541800 Strong transcription H1 Derived Mesenchymal Stem Cells ES cell derived
26 chr2:133539800-133542800 Strong transcription Fetal Stomach stomach
27 chr2:133540000-133541000 Enhancers Brain Anterior Caudate brain
28 chr2:133540000-133546600 Weak transcription Liver Liver
29 chr2:133540200-133540400 Enhancers Brain Angular Gyrus brain
30 chr2:133540200-133540400 ZNF genes & repeats Lung lung
31 chr2:133540200-133540600 Enhancers Brain Dorsolateral Prefrontal Cortex brain
32 chr2:133540200-133543200 Weak transcription Brain Germinal Matrix brain
33 chr2:133540200-133546000 Weak transcription Brain Inferior Temporal Lobe brain

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