Variant report

Variant	rs2095669
Chromosome Location	chr1:220708949-220708950
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 37 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:37)

rs_ID	r²[population]
rs10863557	0.86[AFR][1000 genomes];0.95[AMR][1000 genomes];0.90[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11118564	0.89[AMR][1000 genomes];0.89[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs11118565	0.95[AMR][1000 genomes];0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs11118566	0.81[AFR][1000 genomes];0.95[AMR][1000 genomes];0.93[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs11118567	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11118570	0.83[AFR][1000 genomes];0.91[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11118573	0.82[AFR][1000 genomes];0.87[AMR][1000 genomes];0.93[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11118576	0.80[AMR][1000 genomes];0.84[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs11118579	0.83[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs11588721	0.84[AFR][1000 genomes];0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12047297	0.86[AMR][1000 genomes];0.90[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs12408540	0.93[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12737023	0.82[AMR][1000 genomes];0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1933001	0.84[AFR][1000 genomes];0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1933007	0.84[AFR][1000 genomes];0.94[AMR][1000 genomes];0.90[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs2152836	0.80[AMR][1000 genomes];0.83[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2244448	0.86[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs2589581	0.87[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs2589586	0.89[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2589589	0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2786598	0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2786606	0.81[EUR][1000 genomes]
rs2786610	0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2786617	0.87[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs35287074	0.90[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs3753873	0.89[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs3753874	0.83[AFR][1000 genomes];0.95[AMR][1000 genomes];0.89[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs3767320	0.84[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs3860322	0.80[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs4846326	0.84[AFR][1000 genomes];0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4846650	0.81[AFR][1000 genomes];0.91[AMR][1000 genomes];0.89[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs4846653	0.81[AFR][1000 genomes];0.95[AMR][1000 genomes];0.93[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs4846655	0.82[AMR][1000 genomes];0.85[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs6541154	0.81[AMR][1000 genomes];0.88[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs6675368	0.81[AFR][1000 genomes];0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7556280	0.81[AFR][1000 genomes];0.95[AMR][1000 genomes];0.93[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9430949	0.80[AMR][1000 genomes];0.85[EUR][1000 genomes];0.81[ASN][1000 genomes]

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:220703400-220724400	Weak transcription	Aorta	Aorta
2	chr1:220704600-220710000	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
3	chr1:220706000-220723800	Weak transcription	Fetal Brain Male	brain
4	chr1:220706800-220710400	ZNF genes & repeats	Cortex derived primary cultured neurospheres	brain
5	chr1:220708800-220718000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast

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