Variant report

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs11950895	0.88[AFR][1000 genomes];0.86[AMR][1000 genomes];0.92[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs11951018	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11951697	0.88[AFR][1000 genomes];0.86[AMR][1000 genomes];0.92[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12515700	1.00[ASN][1000 genomes]
rs12717855	0.86[ASN][1000 genomes]
rs13163589	0.83[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs13174082	1.00[AFR][1000 genomes];0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13182827	0.80[ASN][1000 genomes]
rs1366608	0.89[ASN][1000 genomes]
rs1376640	0.89[ASN][1000 genomes]
rs17663037	0.96[AFR][1000 genomes];0.86[AMR][1000 genomes];0.92[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs17663169	1.00[AFR][1000 genomes];0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1864198	0.89[ASN][1000 genomes]
rs2112695	1.00[AFR][1000 genomes];0.92[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34789586	1.00[ASN][1000 genomes]
rs6579922	1.00[ASN][1000 genomes]
rs6870899	0.89[ASN][1000 genomes]
rs6878435	1.00[ASN][1000 genomes]
rs6888966	0.96[ASN][1000 genomes]
rs7722799	1.00[ASN][1000 genomes]
rs7724185	1.00[AFR][1000 genomes];0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1023828	chr5:151522149-151956217	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
2	nsv830519	chr5:151588627-151800192	Enhancers Weak transcription Active TSS Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:151651400-151657200	Weak transcription	Skeletal Muscle Female	skeletal muscle
2	chr5:151651800-151656800	Weak transcription	Pancreatic Islets	Pancreatic Islet
3	chr5:151651800-151657200	Weak transcription	Aorta	Aorta

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