Variant report

rSNPs within LD-proxies of this variant (count:36)

rs_ID	r²[population]
rs1017527	0.86[EUR][1000 genomes]
rs10857396	0.81[AFR][1000 genomes];0.84[EUR][1000 genomes]
rs12163905	0.86[EUR][1000 genomes]
rs12508480	0.86[EUR][1000 genomes]
rs12509465	0.86[EUR][1000 genomes]
rs13102826	0.86[EUR][1000 genomes]
rs13120964	0.84[EUR][1000 genomes]
rs13129274	0.86[EUR][1000 genomes]
rs13149611	0.86[EUR][1000 genomes]
rs1373038	0.86[EUR][1000 genomes]
rs1373039	0.86[EUR][1000 genomes]
rs1373040	0.81[AFR][1000 genomes];0.86[EUR][1000 genomes]
rs1443184	0.86[EUR][1000 genomes]
rs1443189	0.86[EUR][1000 genomes]
rs1443190	0.81[AFR][1000 genomes];0.86[EUR][1000 genomes]
rs1814061	0.86[EUR][1000 genomes]
rs1822363	0.84[EUR][1000 genomes]
rs1838085	0.86[EUR][1000 genomes]
rs1838087	0.86[EUR][1000 genomes]
rs2008423	0.88[EUR][1000 genomes]
rs2120159	0.86[EUR][1000 genomes]
rs2120160	0.86[EUR][1000 genomes]
rs2197215	0.86[EUR][1000 genomes]
rs3967128	0.86[EUR][1000 genomes]
rs4690716	0.83[ASN][1000 genomes]
rs6537122	0.86[EUR][1000 genomes]
rs7376422	0.84[EUR][1000 genomes]
rs7434560	0.86[EUR][1000 genomes]
rs7437824	0.86[EUR][1000 genomes]
rs7441741	0.89[AMR][1000 genomes];0.83[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs745719	0.86[EUR][1000 genomes]
rs7670457	0.86[EUR][1000 genomes]
rs7671783	0.86[EUR][1000 genomes]
rs7685002	0.86[EUR][1000 genomes]
rs894584	0.86[EUR][1000 genomes]
rs962372	0.86[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv830101	chr4:143518810-143684392	ZNF genes & repeats Enhancers Flanking Active TSS Weak transcription Strong transcription Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' Active TSS	Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:143537000-143575800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr4:143538800-143548800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
3	chr4:143547200-143548200	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Male	--

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