Variant report

Variant	rs214900
Chromosome Location	chr11:17227762-17227763
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	STAT3	chr11:17227755-17227948	MCF10A-Er-Src	breast:	n/a	n/a

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:17226063..17227781-chr11:17229189..17231639,2	K562	blood:
2	chr11:17227592..17232225-chr11:17372606..17377021,9	K562	blood:

Variant related genes	Relation type
NUCB2	TF binding region
ENSG00000011405	Chromatin interaction
ENSG00000070081	Chromatin interaction
ENSG00000188211	Chromatin interaction

Extended variants
information (count: 139 )
Associated
traits (count: 13 )

rSNPs within LD-proxies of this variant (count:135)

rs_ID	r²[population]
rs10741724	0.86[AFR][1000 genomes];0.93[AMR][1000 genomes];0.93[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs10766381	0.92[AFR][1000 genomes];0.93[AMR][1000 genomes];0.92[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10766382	0.81[ASN][1000 genomes]
rs10832733	0.94[ASW][hapmap];0.96[CEU][hapmap];0.96[CHD][hapmap];1.00[JPT][hapmap];0.84[LWK][hapmap];0.91[MEX][hapmap];0.97[MKK][hapmap];0.98[TSI][hapmap];0.96[YRI][hapmap];0.81[AMR][1000 genomes];0.91[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs10832735	0.83[EUR][1000 genomes]
rs10832736	0.81[AMR][1000 genomes];0.91[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10832739	0.80[AFR][1000 genomes];0.89[AMR][1000 genomes];0.96[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs10832743	0.95[AFR][1000 genomes];0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10832745	0.84[AFR][1000 genomes];0.93[AMR][1000 genomes];0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs10832746	0.90[AFR][1000 genomes];0.91[AMR][1000 genomes];0.92[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs10832747	0.95[CEU][hapmap];0.92[JPT][hapmap];0.91[YRI][hapmap];0.84[AFR][1000 genomes];0.92[AMR][1000 genomes];0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs10832748	0.86[AFR][1000 genomes];0.92[AMR][1000 genomes];0.93[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs10832750	0.81[ASN][1000 genomes]
rs10832752	0.86[JPT][hapmap]
rs11024143	0.83[EUR][1000 genomes]
rs11024148	0.94[ASW][hapmap];0.92[CEU][hapmap];0.82[CHB][hapmap];1.00[JPT][hapmap];0.84[LWK][hapmap];0.91[MEX][hapmap];0.96[MKK][hapmap];0.89[TSI][hapmap];0.96[YRI][hapmap];0.86[EUR][1000 genomes]
rs11024158	0.94[ASW][hapmap];0.96[CEU][hapmap];0.82[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];0.91[MKK][hapmap];0.98[TSI][hapmap];0.87[AMR][1000 genomes];0.96[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs11024159	0.89[AMR][1000 genomes];0.96[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs11024163	0.80[AFR][1000 genomes];0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs11024204	1.00[ASW][hapmap];1.00[CEU][hapmap];0.82[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.94[MKK][hapmap];0.98[TSI][hapmap];0.96[YRI][hapmap];0.84[AFR][1000 genomes];0.93[AMR][1000 genomes];0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs11024207	0.89[AMR][1000 genomes];0.89[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11024208	0.91[AMR][1000 genomes];0.92[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11024220	0.81[ASN][1000 genomes]
rs11024221	0.81[ASN][1000 genomes]
rs11024223	0.91[CHD][hapmap];0.86[JPT][hapmap];0.81[ASN][1000 genomes]
rs11024227	0.84[EUR][1000 genomes]
rs1125737	0.90[AMR][1000 genomes];0.92[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs11821773	0.81[AMR][1000 genomes];0.90[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs12276859	0.81[ASN][1000 genomes]
rs12280930	0.96[CEU][hapmap];0.82[CHB][hapmap];1.00[JPT][hapmap];0.96[YRI][hapmap];0.88[AMR][1000 genomes];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12286505	0.96[CEU][hapmap];0.82[CHB][hapmap];1.00[JPT][hapmap];0.96[YRI][hapmap];0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1236309	0.89[AMR][1000 genomes];0.94[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs1236310	0.82[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs12804000	0.82[AFR][1000 genomes];0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1488933	0.81[ASN][1000 genomes]
rs1685932	1.00[AFR][1000 genomes];0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1979603	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs1989405	0.81[AFR][1000 genomes];0.88[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2008905	0.83[EUR][1000 genomes]
rs2052188	0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs214075	0.83[CHD][hapmap]
rs214076	0.83[CHD][hapmap]
rs214082	0.82[CHB][hapmap];0.87[CHD][hapmap];0.92[JPT][hapmap]
rs214083	0.82[CHB][hapmap];0.92[JPT][hapmap]
rs214092	0.81[CHB][hapmap];0.87[CHD][hapmap];0.92[JPT][hapmap]
rs214093	0.82[CHB][hapmap];0.92[JPT][hapmap]
rs214097	0.82[CHB][hapmap];0.87[CHD][hapmap];0.92[JPT][hapmap]
rs214101	0.91[CHD][hapmap]
rs214901	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.86[LWK][hapmap];1.00[MEX][hapmap];0.98[MKK][hapmap];1.00[TSI][hapmap];0.96[YRI][hapmap];0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs214904	0.82[AFR][1000 genomes];0.92[ASN][1000 genomes]
rs214906	0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs214907	0.85[ASN][1000 genomes]
rs214909	0.82[AFR][1000 genomes];0.98[AMR][1000 genomes];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs214910	1.00[ASW][hapmap];1.00[CEU][hapmap];0.82[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.82[LWK][hapmap];1.00[MEX][hapmap];0.94[MKK][hapmap];0.98[TSI][hapmap];0.92[YRI][hapmap];0.87[AFR][1000 genomes];0.98[AMR][1000 genomes];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs214911	0.91[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs214912	0.83[AFR][1000 genomes];0.95[AMR][1000 genomes];0.93[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs214913	0.87[AFR][1000 genomes];0.98[AMR][1000 genomes];0.93[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs214914	1.00[CEU][hapmap];1.00[JPT][hapmap];0.95[YRI][hapmap];0.85[AFR][1000 genomes];0.98[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs214915	0.85[AFR][1000 genomes];0.94[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs214916	0.97[AFR][1000 genomes];0.98[AMR][1000 genomes];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs214917	0.98[AMR][1000 genomes];0.92[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs214918	0.87[AFR][1000 genomes];0.98[AMR][1000 genomes];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs214919	0.97[AFR][1000 genomes];0.98[AMR][1000 genomes];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs214920	0.87[AFR][1000 genomes];0.98[AMR][1000 genomes];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs214921	0.87[AFR][1000 genomes];0.98[AMR][1000 genomes];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs214922	0.87[AFR][1000 genomes];0.98[AMR][1000 genomes];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs214923	0.84[AFR][1000 genomes];0.85[ASN][1000 genomes]
rs214925	1.00[ASW][hapmap];1.00[CEU][hapmap];0.82[CHB][hapmap];1.00[CHD][hapmap];0.91[GIH][hapmap];1.00[JPT][hapmap];0.82[LWK][hapmap];1.00[MEX][hapmap];0.94[MKK][hapmap];0.95[TSI][hapmap];0.92[YRI][hapmap];0.87[AFR][1000 genomes];0.97[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs214926	0.83[AFR][1000 genomes];0.93[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs214927	1.00[CEU][hapmap];0.96[YRI][hapmap];0.97[AFR][1000 genomes];0.98[AMR][1000 genomes];0.92[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs214933	1.00[CHD][hapmap];0.80[ASN][1000 genomes]
rs214935	0.96[CEU][hapmap];0.82[CHB][hapmap];1.00[JPT][hapmap];0.96[YRI][hapmap];0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs214936	1.00[ASW][hapmap];0.96[CEU][hapmap];0.82[CHB][hapmap];1.00[CHD][hapmap];0.91[GIH][hapmap];1.00[JPT][hapmap];0.89[LWK][hapmap];0.95[MEX][hapmap];0.98[MKK][hapmap];0.98[TSI][hapmap];1.00[YRI][hapmap];0.84[AFR][1000 genomes];0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs214937	0.87[AFR][1000 genomes];0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs214939	0.96[CEU][hapmap];0.82[CHB][hapmap];1.00[JPT][hapmap];0.96[YRI][hapmap];0.82[AFR][1000 genomes];0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs214940	1.00[ASW][hapmap];0.96[CEU][hapmap];0.82[CHB][hapmap];1.00[CHD][hapmap];0.84[GIH][hapmap];1.00[JPT][hapmap];0.95[LWK][hapmap];0.95[MEX][hapmap];0.98[MKK][hapmap];0.98[TSI][hapmap];1.00[YRI][hapmap];0.88[AFR][1000 genomes];0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2171615	0.93[AFR][1000 genomes];0.93[AMR][1000 genomes];0.93[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs35933265	0.86[EUR][1000 genomes]
rs4356203	0.88[CEU][hapmap];0.87[CHD][hapmap];0.85[JPT][hapmap];0.83[TSI][hapmap];0.83[EUR][1000 genomes]
rs4508187	0.81[ASN][1000 genomes]
rs4509731	0.85[AMR][1000 genomes];0.89[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs511119	0.88[AFR][1000 genomes];0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs512852	0.96[CEU][hapmap];0.82[CHB][hapmap];1.00[JPT][hapmap];0.96[YRI][hapmap];0.87[AFR][1000 genomes];0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs527810	0.89[AFR][1000 genomes];0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs536628	0.98[AFR][1000 genomes];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs542274	0.94[AFR][1000 genomes];0.84[ASN][1000 genomes]
rs545773	0.88[AFR][1000 genomes];0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs550667	0.96[CEU][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs553711	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs567033	0.83[AFR][1000 genomes];0.85[ASN][1000 genomes]
rs577207	0.87[AFR][1000 genomes];0.91[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs589319	0.97[AFR][1000 genomes];0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs59192183	0.80[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs594034	0.88[AFR][1000 genomes];0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs598946	0.85[AFR][1000 genomes];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs603618	1.00[CEU][hapmap];0.82[CHB][hapmap];1.00[JPT][hapmap];0.87[YRI][hapmap];0.84[AFR][1000 genomes];0.93[AMR][1000 genomes];0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs61357262	0.86[AFR][1000 genomes];0.89[AMR][1000 genomes];0.90[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs615358	0.87[CEU][hapmap];0.81[CHB][hapmap];1.00[JPT][hapmap];0.84[AMR][1000 genomes];0.92[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs618331	1.00[CEU][hapmap];0.82[CHB][hapmap];1.00[JPT][hapmap];0.96[YRI][hapmap];0.84[AFR][1000 genomes];0.93[AMR][1000 genomes];0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs61881888	0.82[EUR][1000 genomes]
rs620241	0.85[AFR][1000 genomes];0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs621246	0.87[AFR][1000 genomes];0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs635802	0.87[AFR][1000 genomes];0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs6486352	0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6486354	0.97[AFR][1000 genomes];0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs6486358	0.83[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs651513	0.87[AFR][1000 genomes];0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs656623	0.98[AFR][1000 genomes];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs662711	0.87[AFR][1000 genomes];0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs667984	0.87[AFR][1000 genomes];0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs677042	0.83[AFR][1000 genomes]
rs677540	1.00[ASW][hapmap];0.96[CEU][hapmap];0.82[CHB][hapmap];1.00[CHD][hapmap];0.91[GIH][hapmap];1.00[JPT][hapmap];0.86[LWK][hapmap];0.95[MEX][hapmap];0.97[MKK][hapmap];0.98[TSI][hapmap];0.96[YRI][hapmap];0.88[AFR][1000 genomes];0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs680205	0.98[AFR][1000 genomes];0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7101686	0.82[AFR][1000 genomes];0.93[AMR][1000 genomes];0.93[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs7106705	0.84[EUR][1000 genomes]
rs7107283	0.85[EUR][1000 genomes]
rs7108315	0.81[ASN][1000 genomes]
rs7118006	0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs7118443	0.89[AMR][1000 genomes];0.86[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs7123301	1.00[ASW][hapmap];0.96[CEU][hapmap];0.82[CHB][hapmap];1.00[CHD][hapmap];0.91[GIH][hapmap];1.00[JPT][hapmap];0.86[LWK][hapmap];0.95[MEX][hapmap];0.97[MKK][hapmap];0.98[TSI][hapmap];0.96[YRI][hapmap];0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7125607	0.96[CEU][hapmap];0.82[CHB][hapmap];1.00[JPT][hapmap];0.96[YRI][hapmap];0.86[EUR][1000 genomes]
rs7128822	0.81[ASN][1000 genomes]
rs7342262	1.00[CEU][hapmap];0.82[CHB][hapmap];0.92[JPT][hapmap];0.84[YRI][hapmap];0.82[AMR][1000 genomes];0.91[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs7396382	0.80[AFR][1000 genomes];0.88[AMR][1000 genomes];0.96[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7396958	0.87[AMR][1000 genomes];0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7478986	0.96[CEU][hapmap];0.91[EUR][1000 genomes]
rs7925692	0.88[ASW][hapmap];1.00[CEU][hapmap];0.82[CHB][hapmap];0.96[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];0.93[MKK][hapmap];0.89[TSI][hapmap];0.92[YRI][hapmap];0.90[AMR][1000 genomes];0.91[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7927240	0.82[CHB][hapmap];1.00[JPT][hapmap]
rs7932916	0.85[EUR][1000 genomes]
rs7935219	0.85[AMR][1000 genomes];0.96[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7937176	1.00[CEU][hapmap];0.92[YRI][hapmap];0.84[AMR][1000 genomes];0.92[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7938820	0.94[ASW][hapmap];0.92[CEU][hapmap];0.82[CHB][hapmap];1.00[JPT][hapmap];0.84[LWK][hapmap];0.91[MEX][hapmap];0.95[MKK][hapmap];0.89[TSI][hapmap];0.92[YRI][hapmap]
rs7940418	0.83[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs7946010	0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7949699	1.00[CEU][hapmap];0.91[CHB][hapmap];1.00[JPT][hapmap];0.84[AFR][1000 genomes];0.93[AMR][1000 genomes];0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv467711	chr11:17027555-17320797	Weak transcription Strong transcription Active TSS Genic enhancers Flanking Active TSS Enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	55 gene(s)	inside rSNPs	diseases
2	nsv553568	chr11:17027555-17320797	Enhancers Weak transcription Strong transcription Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	55 gene(s)	inside rSNPs	diseases
3	nsv469762	chr11:17170690-17320691	Strong transcription Active TSS Weak transcription Enhancers Flanking Active TSS Genic enhancers Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	24 gene(s)	inside rSNPs	diseases
4	nsv482905	chr11:17170690-17320691	Strong transcription Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	24 gene(s)	inside rSNPs	diseases

mRNA abundance (count:13)

SNP	Gene	Cis/trans	Tissue	Source
rs214900	NUCB2	cis	multi-tissue	Pritchard
rs214900	NUCB2	cis	cerebellum	SCAN
rs214900	GTF2H1	cis	cerebellum	SCAN
rs214900	OR7E14P	cis	Nerve Tibial	GTEx
rs214900	SAA4	cis	parietal	SCAN
rs214900	SPTY2D1	cis	parietal	SCAN
rs214900	SERGEF	cis	parietal	SCAN
rs214900	PDE3B	cis	parietal	SCAN
rs214900	NUCB2	cis	Lymphoblastoid	GTEx
rs214900	OR7E14P	cis	Esophagus Mucosa	GTEx
rs214900	C7orf72	trans	cerebellum	SCAN
rs214900	NUCB2	cis	lymphoblastoid	seeQTL
rs214900	RNU14	cis	multi-tissue	Pritchard

Chromatin state (count:119 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:17167400-17228000	Weak transcription	Fetal Thymus	thymus
2	chr11:17184800-17228800	Weak transcription	Esophagus	oesophagus
3	chr11:17187000-17228000	Weak transcription	Colonic Mucosa	Colon
4	chr11:17191200-17227800	Weak transcription	Primary T killer memory cells from peripheral blood	blood
5	chr11:17194200-17228000	Weak transcription	H9 Cell Line	embryonic stem cell
6	chr11:17197600-17228000	Weak transcription	Brain Angular Gyrus	brain
7	chr11:17203000-17228800	Weak transcription	Spleen	Spleen
8	chr11:17207400-17228200	Weak transcription	Colon Smooth Muscle	Colon
9	chr11:17209400-17228000	Weak transcription	K562	blood
10	chr11:17210600-17228200	Weak transcription	Brain Inferior Temporal Lobe	brain
11	chr11:17210600-17228200	Weak transcription	Brain Substantia Nigra	brain
12	chr11:17210800-17228000	Weak transcription	iPS-15b Cell Line	embryonic stem cell
13	chr11:17212600-17228600	Weak transcription	Placenta Amnion	Placenta Amnion
14	chr11:17213200-17228200	Weak transcription	Brain Hippocampus Middle	brain
15	chr11:17214400-17228000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
16	chr11:17215200-17228000	Weak transcription	Primary neutrophils fromperipheralblood	blood
17	chr11:17215200-17228000	Weak transcription	Fetal Kidney	kidney
18	chr11:17216000-17228000	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
19	chr11:17216000-17228000	Weak transcription	iPS-18 Cell Line	embryonic stem cell
20	chr11:17216000-17228000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
21	chr11:17216000-17228000	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
22	chr11:17216000-17228000	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
23	chr11:17216000-17228000	Weak transcription	Brain Anterior Caudate	brain
24	chr11:17216000-17228000	Weak transcription	Duodenum Mucosa	Duodenum
25	chr11:17216000-17228000	Weak transcription	Fetal Brain Female	brain
26	chr11:17216000-17228000	Weak transcription	Fetal Lung	lung
27	chr11:17216000-17228000	Weak transcription	Placenta	Placenta
28	chr11:17216000-17228200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
29	chr11:17216000-17228200	Weak transcription	Primary hematopoietic stem cells	blood
30	chr11:17216000-17228200	Weak transcription	Rectal Smooth Muscle	rectum
31	chr11:17216000-17228200	Weak transcription	NH-A	brain
32	chr11:17216000-17228400	Weak transcription	Ovary	ovary
33	chr11:17216200-17227800	Weak transcription	Primary T helper cells fromperipheralblood	blood
34	chr11:17216200-17227800	Weak transcription	Cortex derived primary cultured neurospheres	brain
35	chr11:17216200-17228000	Weak transcription	H1 Cell Line	embryonic stem cell
36	chr11:17216200-17228000	Weak transcription	Primary T cells from cord blood	blood
37	chr11:17216200-17228000	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
38	chr11:17216200-17228000	Weak transcription	Brain Germinal Matrix	brain
39	chr11:17216200-17228200	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
40	chr11:17216200-17228600	Weak transcription	Fetal Muscle Trunk	muscle
41	chr11:17216400-17228200	Weak transcription	Thymus	Thymus
42	chr11:17219000-17228800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
43	chr11:17219200-17228000	Weak transcription	HMEC	breast
44	chr11:17219200-17228000	Weak transcription	NHLF	lung
45	chr11:17219200-17228200	Weak transcription	HSMM	muscle
46	chr11:17219200-17228800	Weak transcription	Sigmoid Colon	Sigmoid Colon
47	chr11:17219400-17227800	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
48	chr11:17219400-17228000	Weak transcription	Monocytes-CD14+_RO01746	blood
49	chr11:17219600-17228000	Weak transcription	Osteobl	bone
50	chr11:17219800-17227800	Weak transcription	Fetal Intestine Large	intestine

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