Variant report

Variant	rs2190864
Chromosome Location	chr14:72416219-72416220
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr14:72409621..72411611-chr14:72415425..72418350,2	K562	blood:

Extended variants
information (count: 46 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:45)

rs_ID	r²[population]
rs1009017	0.88[JPT][hapmap]
rs11158920	0.94[JPT][hapmap];0.87[ASN][1000 genomes]
rs11158926	1.00[CHB][hapmap];0.94[JPT][hapmap]
rs11158927	0.88[JPT][hapmap]
rs11620690	0.89[JPT][hapmap]
rs11623492	0.88[JPT][hapmap]
rs11623535	0.88[JPT][hapmap]
rs11625937	0.88[JPT][hapmap]
rs11627768	0.93[JPT][hapmap]
rs11628133	0.82[JPT][hapmap]
rs12148043	0.82[JPT][hapmap]
rs12433721	0.94[JPT][hapmap];0.86[ASN][1000 genomes]
rs12434220	0.96[ASN][1000 genomes]
rs12897929	1.00[CHB][hapmap];0.82[JPT][hapmap];0.92[ASN][1000 genomes]
rs1476745	0.94[CHB][hapmap];0.94[JPT][hapmap]
rs17093750	0.89[JPT][hapmap]
rs17105346	0.88[JPT][hapmap]
rs17105566	0.83[JPT][hapmap]
rs17105606	0.83[JPT][hapmap]
rs17105690	0.83[JPT][hapmap]
rs17768361	0.94[CHB][hapmap];0.94[JPT][hapmap]
rs2159457	0.80[CHB][hapmap];0.82[ASN][1000 genomes]
rs2238277	0.85[JPT][hapmap];0.81[ASN][1000 genomes]
rs2238284	0.93[CEU][hapmap]
rs2877771	0.97[ASN][1000 genomes]
rs34729701	0.97[ASN][1000 genomes]
rs35051666	0.97[ASN][1000 genomes]
rs35858041	0.97[ASN][1000 genomes]
rs36332	0.89[CEU][hapmap]
rs3784055	0.94[JPT][hapmap]
rs3784056	0.94[JPT][hapmap]
rs3784058	0.94[JPT][hapmap];0.86[ASN][1000 genomes]
rs4243640	0.88[JPT][hapmap]
rs4350510	0.89[JPT][hapmap]
rs4354860	0.88[JPT][hapmap]
rs4899412	0.88[JPT][hapmap]
rs4902958	0.94[JPT][hapmap];0.82[ASN][1000 genomes]
rs4902966	0.89[JPT][hapmap]
rs56067914	0.92[ASN][1000 genomes]
rs6574035	0.80[EUR][1000 genomes]
rs7148606	0.91[EUR][1000 genomes]
rs72734102	0.82[ASN][1000 genomes]
rs72735921	0.82[ASN][1000 genomes]
rs72735923	0.82[ASN][1000 genomes]
rs8013467	0.88[JPT][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv530794	chr14:72113818-73034008	Enhancers Bivalent/Poised TSS Weak transcription Strong transcription Flanking Active TSS Genic enhancers Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:72410600-72425400	Weak transcription	Left Ventricle	heart
2	chr14:72416200-72416800	Strong transcription	Cortex derived primary cultured neurospheres	brain

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