Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr14:72423860..72426368-chr14:72427413..72429540,3	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:29)

rs_ID	r²[population]
rs10132089	0.85[ASN][1000 genomes]
rs10138176	0.90[CHB][hapmap]
rs11623548	0.86[CHB][hapmap]
rs11623588	0.86[CHB][hapmap]
rs12433726	0.81[ASN][1000 genomes]
rs12590831	0.86[CHB][hapmap]
rs17093752	0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1860104	0.82[CHB][hapmap]
rs1978225	0.86[CHB][hapmap]
rs1978227	0.85[CHB][hapmap]
rs2010848	0.91[CHB][hapmap]
rs2191251	0.98[EUR][1000 genomes]
rs2238284	0.90[CHB][hapmap];0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2283424	0.86[CHB][hapmap]
rs2283426	0.86[CHB][hapmap]
rs2332687	0.96[EUR][1000 genomes]
rs2332699	0.80[ASN][1000 genomes]
rs36332	0.86[CHB][hapmap];0.81[AMR][1000 genomes];0.93[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs36340	0.81[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs36341	0.92[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs36344	0.81[ASN][1000 genomes]
rs36345	0.81[ASN][1000 genomes]
rs36350	0.80[ASN][1000 genomes]
rs3825716	0.91[CHB][hapmap];0.83[ASN][1000 genomes]
rs4899405	0.81[ASN][1000 genomes]
rs4902964	0.86[CHB][hapmap]
rs7148606	0.85[EUR][1000 genomes]
rs7155855	0.86[CHB][hapmap];0.83[ASN][1000 genomes]
rs7161596	0.91[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv530794	chr14:72113818-73034008	Enhancers Bivalent/Poised TSS Weak transcription Strong transcription Flanking Active TSS Genic enhancers Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:72410600-72425400	Weak transcription	Left Ventricle	heart
2	chr14:72417800-72425200	Weak transcription	Cortex derived primary cultured neurospheres	brain
3	chr14:72424200-72425200	Strong transcription	Ganglion Eminence derived primary cultured neurospheres	brain
4	chr14:72424400-72425400	Enhancers	GM12878-XiMat	blood

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