Variant report

Variant	rs2193206
Chromosome Location	chr7:104253921-104253922
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 1 )

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs11764816	0.88[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs12666704	1.00[CHB][hapmap];0.97[CHD][hapmap];0.89[GIH][hapmap];1.00[JPT][hapmap]
rs17422684	1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[YRI][hapmap]
rs2193209	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs2216243	0.82[CHB][hapmap]
rs6948818	0.81[ASW][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.87[GIH][hapmap];1.00[JPT][hapmap];0.80[YRI][hapmap]
rs6974889	0.84[CHB][hapmap];0.90[JPT][hapmap]
rs7785650	0.91[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[YRI][hapmap]
rs9640682	0.82[CHB][hapmap]
rs9641335	0.84[CHB][hapmap];0.87[GIH][hapmap];0.90[JPT][hapmap]

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs2193206	PUS7	cis	parietal	SCAN

Chromatin state (count:0 , 50 per page) page:

No data

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links