Variant report

Variant	rs2221923
Chromosome Location	chr1:94195170-94195171
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr1:94146957..94149013-chr1:94194434..94197028,2	MCF-7	breast:
2	chr1:94194863..94197448-chr1:94201555..94203436,2	K562	blood:

Variant related genes	Relation type
ENSG00000137936	Chromatin interaction

rs_ID	r²[population]
rs10489541	1.00[EUR][1000 genomes]
rs11164954	1.00[EUR][1000 genomes]
rs11800247	1.00[EUR][1000 genomes]
rs11802499	1.00[EUR][1000 genomes]
rs11805042	1.00[EUR][1000 genomes]
rs11806965	1.00[EUR][1000 genomes]
rs12068954	1.00[EUR][1000 genomes]
rs17110193	1.00[EUR][1000 genomes]
rs17110312	1.00[EUR][1000 genomes]
rs17110320	1.00[EUR][1000 genomes]
rs17110613	1.00[EUR][1000 genomes]
rs236309	1.00[EUR][1000 genomes]
rs35650636	1.00[EUR][1000 genomes]
rs58024738	1.00[EUR][1000 genomes]
rs58126899	1.00[EUR][1000 genomes]
rs58679238	1.00[EUR][1000 genomes]
rs59493724	1.00[EUR][1000 genomes]
rs59653321	1.00[EUR][1000 genomes]
rs60179644	1.00[EUR][1000 genomes]
rs60188127	1.00[EUR][1000 genomes]
rs60226009	1.00[EUR][1000 genomes]
rs60680584	1.00[EUR][1000 genomes]
rs61372707	1.00[EUR][1000 genomes]
rs61564641	1.00[EUR][1000 genomes]
rs6541390	1.00[AFR][1000 genomes]
rs6541391	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs6541392	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs6661879	1.00[EUR][1000 genomes]
rs6671646	1.00[EUR][1000 genomes]
rs6677068	1.00[EUR][1000 genomes]
rs6686775	1.00[EUR][1000 genomes]
rs6703195	1.00[EUR][1000 genomes]
rs72963382	1.00[EUR][1000 genomes]
rs72967379	1.00[EUR][1000 genomes]
rs72971232	1.00[EUR][1000 genomes]
rs7525976	1.00[EUR][1000 genomes]
rs7526263	1.00[EUR][1000 genomes]
rs7541690	1.00[EUR][1000 genomes]
rs7543184	1.00[EUR][1000 genomes]
rs7548581	1.00[EUR][1000 genomes]
rs871855	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes]

Chromatin state (count:31 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:94188000-94198400	Weak transcription	iPS-15b Cell Line	embryonic stem cell
2	chr1:94188800-94198400	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
3	chr1:94189000-94195200	Weak transcription	Brain Angular Gyrus	brain
4	chr1:94189000-94195200	Weak transcription	Psoas Muscle	Psoas
5	chr1:94189000-94200000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
6	chr1:94189200-94195800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
7	chr1:94189400-94195200	Weak transcription	Fetal Lung	lung
8	chr1:94189400-94197400	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
9	chr1:94189600-94195200	Weak transcription	Placenta	Placenta
10	chr1:94189600-94198200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
11	chr1:94189800-94195200	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
12	chr1:94189800-94196000	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
13	chr1:94190000-94196600	Weak transcription	Hela-S3	cervix
14	chr1:94190000-94199000	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
15	chr1:94190200-94198200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
16	chr1:94190400-94199000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
17	chr1:94190600-94200800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
18	chr1:94193000-94198000	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
19	chr1:94193400-94198000	Enhancers	Breast Myoepithelial Primary Cells	Breast
20	chr1:94193600-94196600	Enhancers	Fetal Muscle Leg	muscle
21	chr1:94193800-94196000	Enhancers	Fetal Muscle Trunk	muscle
22	chr1:94193800-94198200	Weak transcription	iPS-18 Cell Line	embryonic stem cell
23	chr1:94194000-94196600	Enhancers	GM12878-XiMat	blood
24	chr1:94194000-94198000	Weak transcription	Primary B cells from peripheral blood	blood
25	chr1:94194400-94195800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
26	chr1:94194400-94196000	Enhancers	Fetal Brain Male	brain
27	chr1:94194400-94197000	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
28	chr1:94194400-94197400	Weak transcription	Right Atrium	heart
29	chr1:94194800-94195800	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
30	chr1:94194800-94195800	Weak transcription	Brain Substantia Nigra	brain
31	chr1:94194800-94197400	Weak transcription	Adipose Nuclei	Adipose

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