Variant report

Variant rs2223876
Chromosome Location chr6:81044039-81044040
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:33 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:81005200-81056200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr6:81027000-81044600 Weak transcription Aorta Aorta
3 chr6:81029400-81079600 Weak transcription HSMM muscle
4 chr6:81033800-81070200 Weak transcription Left Ventricle heart
5 chr6:81036800-81044600 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr6:81037400-81044800 Enhancers Cortex derived primary cultured neurospheres brain
7 chr6:81037600-81044400 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
8 chr6:81038200-81044800 Weak transcription Fetal Lung lung
9 chr6:81039200-81045200 Enhancers H1 Cell Line embryonic stem cell
10 chr6:81039400-81044200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
11 chr6:81039600-81044800 Weak transcription Brain Hippocampus Middle brain
12 chr6:81041000-81044400 Enhancers ES-UCSF4 Cell Line embryonic stem cell
13 chr6:81041200-81044400 Enhancers Fetal Brain Female brain
14 chr6:81041600-81044200 Enhancers HUES64 Cell Line embryonic stem cell
15 chr6:81041600-81044400 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
16 chr6:81041600-81044800 Enhancers ES-I3 Cell Line embryonic stem cell
17 chr6:81041600-81044800 Enhancers iPS-18 Cell Line embryonic stem cell
18 chr6:81041600-81045600 Enhancers iPS-15b Cell Line embryonic stem cell
19 chr6:81042000-81044400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
20 chr6:81042000-81044600 Weak transcription Fetal Muscle Leg muscle
21 chr6:81042000-81044800 Weak transcription Brain Anterior Caudate brain
22 chr6:81042200-81056400 Weak transcription Fetal Heart heart
23 chr6:81042800-81044600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
24 chr6:81043200-81045000 Weak transcription HUES6 Cell Line embryonic stem cell
25 chr6:81043600-81044400 Flanking Active TSS iPS-20b Cell Line embryonic stem cell
26 chr6:81043600-81045400 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
27 chr6:81043800-81044400 Flanking Active TSS HUES48 Cell Line embryonic stem cell
28 chr6:81043800-81044400 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
29 chr6:81043800-81044800 Enhancers Liver Liver
30 chr6:81043800-81045000 Weak transcription Brain Germinal Matrix brain
31 chr6:81044000-81044200 Weak transcription ES-WA7 Cell Line embryonic stem cell
32 chr6:81044000-81044600 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
33 chr6:81044000-81045200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin

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