Variant report

Variant	rs2225110
Chromosome Location	chr1:71273108-71273109
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 18 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:18)

rs_ID	r²[population]
rs1327452	0.92[AFR][1000 genomes];0.96[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs1327462	0.92[AFR][1000 genomes];0.92[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs1409979	0.86[AFR][1000 genomes];0.81[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs1409980	0.81[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs1409986	0.85[EUR][1000 genomes]
rs1414069	0.84[EUR][1000 genomes]
rs1591385	0.98[EUR][1000 genomes]
rs1854149	0.84[AFR][1000 genomes];0.97[EUR][1000 genomes]
rs2209747	0.89[AFR][1000 genomes];0.81[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2257713	0.92[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2258725	0.83[AFR][1000 genomes];0.98[EUR][1000 genomes]
rs2782785	0.96[EUR][1000 genomes]
rs3120156	0.96[EUR][1000 genomes]
rs3131375	0.89[AFR][1000 genomes];0.96[EUR][1000 genomes]
rs6424406	0.93[EUR][1000 genomes]
rs7515193	0.86[AFR][1000 genomes];0.92[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs7525012	0.92[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs7551638	0.94[AFR][1000 genomes];0.92[AMR][1000 genomes];0.98[EUR][1000 genomes]

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:71272600-71273200	Active TSS	Gastric	stomach

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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