The 2.0 version of rSNPBase

Variant report

Variant rs2244005
Chromosome Location chr1:93313579-93313580
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:93 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:93300400-93316000 Strong transcription Primary B cells from cord blood blood
2 chr1:93301000-93318400 Strong transcription Primary B cells from peripheral blood blood
3 chr1:93303000-93317200 Weak transcription Right Ventricle heart
4 chr1:93304400-93349000 Weak transcription Aorta Aorta
5 chr1:93305200-93317200 Weak transcription Fetal Heart heart
6 chr1:93305800-93316200 Strong transcription Primary T regulatory cells fromperipheralblood blood
7 chr1:93306000-93316800 Strong transcription Primary T helper cells fromperipheralblood blood
8 chr1:93306000-93317200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
9 chr1:93306400-93313800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr1:93306400-93317200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
11 chr1:93306600-93317400 Weak transcription Brain Angular Gyrus brain
12 chr1:93306800-93324800 Weak transcription Pancreas Pancrea
13 chr1:93307000-93316600 Strong transcription Primary T helper cells PMA-I stimulated --
14 chr1:93307000-93324800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
15 chr1:93307200-93320000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
16 chr1:93307800-93316800 Weak transcription Fetal Lung lung
17 chr1:93308000-93323400 Weak transcription Small Intestine intestine
18 chr1:93308000-93324600 Weak transcription Psoas Muscle Psoas
19 chr1:93309200-93317400 Weak transcription Placenta Amnion Placenta Amnion
20 chr1:93309400-93324800 Weak transcription NHDF-Ad bronchial
21 chr1:93309600-93314000 Weak transcription Hela-S3 cervix
22 chr1:93309600-93324800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
23 chr1:93309800-93314800 Weak transcription Brain Inferior Temporal Lobe brain
24 chr1:93309800-93315000 Weak transcription Sigmoid Colon Sigmoid Colon
25 chr1:93309800-93315000 Weak transcription Thymus Thymus
26 chr1:93309800-93315400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
27 chr1:93309800-93317200 Weak transcription K562 blood
28 chr1:93309800-93317400 Weak transcription Ovary ovary
29 chr1:93309800-93317400 Weak transcription Rectal Smooth Muscle rectum
30 chr1:93309800-93317600 Weak transcription Primary neutrophils fromperipheralblood blood
31 chr1:93309800-93318200 Weak transcription Primary hematopoietic stem cells short term culture blood
32 chr1:93309800-93320000 Weak transcription Spleen Spleen
33 chr1:93309800-93324200 Weak transcription Primary T killer naive cells fromperipheralblood blood
34 chr1:93309800-93324400 Weak transcription A549 lung
35 chr1:93309800-93324400 Weak transcription Osteobl bone
36 chr1:93309800-93342400 Weak transcription NHLF lung
37 chr1:93310000-93314600 Weak transcription Primary T helper naive cells from peripheral blood blood
38 chr1:93310000-93314800 Weak transcription Rectal Mucosa Donor 29 rectum
39 chr1:93310000-93315600 Weak transcription Brain Anterior Caudate brain
40 chr1:93310000-93315600 Weak transcription Colon Smooth Muscle Colon
41 chr1:93310000-93317200 Weak transcription Brain Hippocampus Middle brain
42 chr1:93310000-93317200 Weak transcription Placenta Placenta
43 chr1:93310000-93317200 Weak transcription Monocytes-CD14+_RO01746 blood
44 chr1:93310000-93318200 Weak transcription Fetal Brain Male brain
45 chr1:93310000-93318800 Weak transcription Primary T killer memory cells from peripheral blood blood
46 chr1:93310000-93319800 Weak transcription Duodenum Smooth Muscle Duodenum
47 chr1:93310000-93324200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
48 chr1:93310000-93324200 Weak transcription Brain Substantia Nigra brain
49 chr1:93310000-93324800 Weak transcription HSMMtube muscle
50 chr1:93310200-93314600 Weak transcription HSMM muscle

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Last update: Aug 31, 2015