Variant report

Variant rs2251373
Chromosome Location chr9:556812-556813
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:51 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:546600-557000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr9:546600-569400 Weak transcription Esophagus oesophagus
3 chr9:547200-557800 Weak transcription Placenta Placenta
4 chr9:547400-557600 Weak transcription H1 Cell Line embryonic stem cell
5 chr9:547600-557600 Weak transcription HUES64 Cell Line embryonic stem cell
6 chr9:547600-571200 Weak transcription Aorta Aorta
7 chr9:547800-563000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr9:548200-560400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
9 chr9:549600-557600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
10 chr9:549600-557800 Weak transcription ES-I3 Cell Line embryonic stem cell
11 chr9:549800-557800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
12 chr9:549800-558000 Weak transcription Brain Angular Gyrus brain
13 chr9:549800-569000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
14 chr9:549800-593800 Weak transcription Lung lung
15 chr9:550200-562400 Weak transcription Fetal Intestine Small intestine
16 chr9:550800-562600 Weak transcription Rectal Mucosa Donor 31 rectum
17 chr9:551600-557400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
18 chr9:552200-557000 Enhancers Breast Myoepithelial Primary Cells Breast
19 chr9:552200-557600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
20 chr9:552200-557800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
21 chr9:552400-560400 Weak transcription Brain Cingulate Gyrus brain
22 chr9:552400-560800 Weak transcription Brain Inferior Temporal Lobe brain
23 chr9:552400-565400 Weak transcription Fetal Muscle Leg muscle
24 chr9:552400-574000 Weak transcription Right Ventricle heart
25 chr9:552800-560400 Weak transcription Cortex derived primary cultured neurospheres brain
26 chr9:552800-560800 Weak transcription Brain Anterior Caudate brain
27 chr9:553000-562400 Weak transcription Brain Substantia Nigra brain
28 chr9:553200-561000 Weak transcription Fetal Lung lung
29 chr9:553200-564800 Weak transcription Fetal Muscle Trunk muscle
30 chr9:555000-568400 Weak transcription Pancreas Pancrea
31 chr9:555400-557000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
32 chr9:555400-557600 Weak transcription Gastric stomach
33 chr9:555400-562400 Weak transcription Sigmoid Colon Sigmoid Colon
34 chr9:555400-568400 Weak transcription Left Ventricle heart
35 chr9:555600-557400 Enhancers A549 lung
36 chr9:555600-557800 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
37 chr9:555800-557000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
38 chr9:555800-557600 Weak transcription HUES6 Cell Line embryonic stem cell
39 chr9:555800-557800 Weak transcription HMEC breast
40 chr9:555800-558200 Weak transcription iPS-15b Cell Line embryonic stem cell
41 chr9:555800-558200 Weak transcription iPS-20b Cell Line embryonic stem cell
42 chr9:556000-558600 Enhancers NHEK skin
43 chr9:556200-557800 Weak transcription Fetal Heart heart
44 chr9:556400-557000 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
45 chr9:556400-557000 Enhancers Fetal Intestine Large intestine
46 chr9:556400-564400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
47 chr9:556800-557000 Enhancers Brain Hippocampus Middle brain
48 chr9:556800-557000 Enhancers Duodenum Smooth Muscle Duodenum
49 chr9:556800-557000 Enhancers Right Atrium heart
50 chr9:556800-567200 Weak transcription Duodenum Mucosa Duodenum

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