The 2.0 version of rSNPBase

Variant report

Variant rs2255717
Chromosome Location chr1:93368500-93368501
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:45 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:93363600-93369400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
2 chr1:93364000-93368800 Weak transcription Primary T regulatory cells fromperipheralblood blood
3 chr1:93364000-93373000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
4 chr1:93364600-93375200 Weak transcription Rectal Mucosa Donor 31 rectum
5 chr1:93365000-93373800 Weak transcription Primary T cells fromperipheralblood blood
6 chr1:93365800-93374600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
7 chr1:93366000-93368800 Weak transcription Fetal Adrenal Gland Adrenal Gland
8 chr1:93366000-93369000 Weak transcription Primary T killer naive cells fromperipheralblood blood
9 chr1:93366200-93369400 Weak transcription Skeletal Muscle Male skeletal muscle
10 chr1:93366400-93368600 Strong transcription Primary B cells from peripheral blood blood
11 chr1:93366400-93369000 Weak transcription Primary T helper naive cells fromperipheralblood blood
12 chr1:93366400-93373800 Weak transcription Liver Liver
13 chr1:93366400-93409200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
14 chr1:93366600-93375000 Weak transcription Brain Angular Gyrus brain
15 chr1:93366800-93369000 Weak transcription Primary T helper cells PMA-I stimulated --
16 chr1:93366800-93369400 Weak transcription Stomach Smooth Muscle stomach
17 chr1:93367000-93390400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
18 chr1:93367200-93368800 Strong transcription Primary T cells from cord blood blood
19 chr1:93367400-93369200 Weak transcription Primary T killer memory cells from peripheral blood blood
20 chr1:93367600-93368600 Weak transcription Spleen Spleen
21 chr1:93367600-93369200 Weak transcription Fetal Brain Female brain
22 chr1:93367600-93373000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
23 chr1:93367600-93375000 Weak transcription Fetal Intestine Small intestine
24 chr1:93367800-93368800 Weak transcription Fetal Muscle Trunk muscle
25 chr1:93367800-93369000 Enhancers Primary Natural Killer cells fromperipheralblood blood
26 chr1:93367800-93373000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
27 chr1:93367800-93373200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
28 chr1:93367800-93373600 Weak transcription HSMMtube muscle
29 chr1:93367800-93375200 Weak transcription HSMM muscle
30 chr1:93367800-93379200 Weak transcription Sigmoid Colon Sigmoid Colon
31 chr1:93368000-93368800 Strong transcription Primary T helper cells fromperipheralblood blood
32 chr1:93368000-93369000 Weak transcription HepG2 liver
33 chr1:93368000-93369200 Weak transcription Thymus Thymus
34 chr1:93368000-93372200 Weak transcription Psoas Muscle Psoas
35 chr1:93368000-93373200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
36 chr1:93368000-93375800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
37 chr1:93368000-93375800 Weak transcription Aorta Aorta
38 chr1:93368200-93373000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
39 chr1:93368200-93373800 Weak transcription Breast Myoepithelial Primary Cells Breast
40 chr1:93368200-93375200 Weak transcription Brain Cingulate Gyrus brain
41 chr1:93368400-93368800 Weak transcription GM12878-XiMat blood
42 chr1:93368400-93369200 Weak transcription Dnd41 blood
43 chr1:93368400-93369400 Enhancers K562 blood
44 chr1:93368400-93371000 Weak transcription Primary B cells from cord blood blood
45 chr1:93368400-93375000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain

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Last update: Aug 31, 2015