Variant report

Variant	rs2267727
Chromosome Location	chr7:31116266-31116267
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:10 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv538811	chr7:30549595-31405593	Transcr. at gene 5' and 3' Enhancers Weak transcription Strong transcription Active TSS Genic enhancers Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	40 gene(s)	inside rSNPs	diseases
2	nsv1016256	chr7:30649212-31163056	Strong transcription Weak transcription Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Active TSS Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	19 gene(s)	inside rSNPs	diseases
3	nsv1023120	chr7:30655070-31185096	Enhancers Strong transcription Bivalent Enhancer Weak transcription Active TSS Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	18 gene(s)	inside rSNPs	diseases
4	esv2761316	chr7:30655082-31166676	Weak transcription Enhancers Flanking Active TSS Strong transcription Active TSS Bivalent/Poised TSS Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	18 gene(s)	inside rSNPs	diseases
5	nsv527038	chr7:30657467-31161945	Flanking Active TSS Weak transcription Strong transcription Enhancers Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	18 gene(s)	inside rSNPs	diseases
6	nsv916877	chr7:30661135-31154731	Weak transcription Genic enhancers Enhancers Active TSS Bivalent Enhancer Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	17 gene(s)	inside rSNPs	diseases
7	nsv1017168	chr7:30663213-31166676	Enhancers Weak transcription Strong transcription Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	18 gene(s)	inside rSNPs	diseases
8	nsv1017808	chr7:30671936-31150473	Enhancers Flanking Bivalent TSS/Enh Genic enhancers Weak transcription Active TSS Bivalent Enhancer Strong transcription ZNF genes & repeats Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	17 gene(s)	inside rSNPs	diseases
9	nsv606523	chr7:31074214-31122542	Weak transcription Enhancers Strong transcription Bivalent Enhancer Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
10	nsv1023274	chr7:31096936-31126310	Strong transcription Weak transcription Genic enhancers Enhancers ZNF genes & repeats Bivalent Enhancer Flanking Active TSS Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:29 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:31101000-31137600	Weak transcription	iPS-20b Cell Line	embryonic stem cell
2	chr7:31101200-31119200	Weak transcription	HUES6 Cell Line	embryonic stem cell
3	chr7:31102000-31126000	Weak transcription	iPS-15b Cell Line	embryonic stem cell
4	chr7:31102000-31134600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
5	chr7:31102400-31131800	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
6	chr7:31110200-31117200	Weak transcription	Spleen	Spleen
7	chr7:31110800-31116800	Weak transcription	H9 Cell Line	embryonic stem cell
8	chr7:31112400-31124000	Weak transcription	Brain Anterior Caudate	brain
9	chr7:31113400-31131800	Weak transcription	iPS-18 Cell Line	embryonic stem cell
10	chr7:31114400-31116600	Strong transcription	Fetal Stomach	stomach
11	chr7:31114400-31117000	Weak transcription	Fetal Brain Male	brain
12	chr7:31114400-31117000	Weak transcription	Pancreas	Pancrea
13	chr7:31114400-31119000	Weak transcription	HUVEC	blood vessel
14	chr7:31114600-31124800	Weak transcription	Brain Angular Gyrus	brain
15	chr7:31115000-31116400	Weak transcription	Fetal Brain Female	brain
16	chr7:31115000-31122200	Weak transcription	Right Atrium	heart
17	chr7:31115200-31116400	Genic enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
18	chr7:31115200-31116800	Weak transcription	Brain Inferior Temporal Lobe	brain
19	chr7:31115200-31116800	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
20	chr7:31115200-31117000	Weak transcription	Brain Substantia Nigra	brain
21	chr7:31115400-31118000	Weak transcription	Brain Hippocampus Middle	brain
22	chr7:31115600-31116400	Strong transcription	Brain Germinal Matrix	brain
23	chr7:31115600-31116600	Bivalent Enhancer	Fetal Muscle Trunk	muscle
24	chr7:31115800-31116800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
25	chr7:31116000-31117400	Weak transcription	Brain Cingulate Gyrus	brain
26	chr7:31116200-31116400	Enhancers	Cortex derived primary cultured neurospheres	brain
27	chr7:31116200-31116600	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
28	chr7:31116200-31116800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
29	chr7:31116200-31116800	Enhancers	Fetal Muscle Leg	muscle

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