The 2.0 version of rSNPBase

Variant report

Variant rs2280060
Chromosome Location chr8:100596065-100596066
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:69 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr8:100550400-100597600 Weak transcription Dnd41 blood
2 chr8:100560400-100596600 Weak transcription Fetal Lung lung
3 chr8:100560400-100619600 Weak transcription Rectal Mucosa Donor 31 rectum
4 chr8:100565400-100597600 Weak transcription Fetal Muscle Leg muscle
5 chr8:100567800-100596600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
6 chr8:100570600-100596200 Weak transcription Primary T helper cells fromperipheralblood blood
7 chr8:100581800-100612400 Weak transcription HSMMtube muscle
8 chr8:100582000-100600400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
9 chr8:100582000-100610400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
10 chr8:100583600-100597200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
11 chr8:100584400-100596200 Weak transcription Osteobl bone
12 chr8:100584600-100598000 Weak transcription Muscle Satellite Cultured Cells --
13 chr8:100586200-100608800 Weak transcription Stomach Smooth Muscle stomach
14 chr8:100586600-100617400 Weak transcription Fetal Kidney kidney
15 chr8:100587000-100596200 Weak transcription Fetal Muscle Trunk muscle
16 chr8:100587400-100598200 Weak transcription Pancreas Pancrea
17 chr8:100588000-100600000 Weak transcription HSMM muscle
18 chr8:100588600-100596800 Weak transcription Small Intestine intestine
19 chr8:100588800-100598600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
20 chr8:100589200-100596200 Weak transcription Primary monocytes fromperipheralblood blood
21 chr8:100590000-100600200 Weak transcription Rectal Smooth Muscle rectum
22 chr8:100590000-100612800 Weak transcription Brain Substantia Nigra brain
23 chr8:100590200-100597800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
24 chr8:100590400-100599800 Weak transcription Colon Smooth Muscle Colon
25 chr8:100590600-100596200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
26 chr8:100590600-100596400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
27 chr8:100590800-100599400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
28 chr8:100590800-100610600 Weak transcription Gastric stomach
29 chr8:100591200-100598200 Weak transcription Lung lung
30 chr8:100591400-100609600 Weak transcription Brain Hippocampus Middle brain
31 chr8:100593200-100598200 Weak transcription Fetal Stomach stomach
32 chr8:100593600-100597600 Strong transcription Primary T cells from cord blood blood
33 chr8:100594200-100596600 Weak transcription Duodenum Mucosa Duodenum
34 chr8:100594400-100596600 Weak transcription Primary T helper naive cells from peripheral blood blood
35 chr8:100594400-100598600 Weak transcription Psoas Muscle Psoas
36 chr8:100594400-100598800 Strong transcription Primary B cells from cord blood blood
37 chr8:100594600-100598000 Weak transcription Fetal Brain Male brain
38 chr8:100594600-100600200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
39 chr8:100594800-100609000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
40 chr8:100595200-100596200 Strong transcription Primary B cells from peripheral blood blood
41 chr8:100595200-100597600 Weak transcription Thymus Thymus
42 chr8:100595200-100598600 Strong transcription Primary T helper naive cells fromperipheralblood blood
43 chr8:100595200-100599400 Strong transcription Primary Natural Killer cells fromperipheralblood blood
44 chr8:100595800-100596600 Strong transcription Primary T regulatory cells fromperipheralblood blood
45 chr8:100595800-100596800 Strong transcription Ovary ovary
46 chr8:100595800-100597200 Strong transcription Monocytes-CD14+_RO01746 blood
47 chr8:100595800-100598400 ZNF genes & repeats Primary T helper cells PMA-I stimulated --
48 chr8:100596000-100596200 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
49 chr8:100596000-100596400 ZNF genes & repeats H9 Derived Neuron Cultured Cells ES cell derived
50 chr8:100596000-100596400 Strong transcription Breast Myoepithelial Primary Cells Breast

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Last update: Aug 31, 2015