Variant report

Variant rs2292117
Chromosome Location chr15:78834689-78834690
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:78832400-78834800 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
2 chr15:78832400-78834800 Active TSS GM12878-XiMat blood
3 chr15:78833600-78838400 Weak transcription Spleen Spleen
4 chr15:78833800-78834800 Weak transcription Lung lung
5 chr15:78833800-78835200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr15:78833800-78835400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
7 chr15:78833800-78835600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
8 chr15:78833800-78837800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
9 chr15:78833800-78838000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
10 chr15:78833800-78838000 Weak transcription Esophagus oesophagus
11 chr15:78833800-78838000 Weak transcription Gastric stomach
12 chr15:78833800-78838400 Weak transcription Pancreas Pancrea
13 chr15:78834000-78834800 Flanking Active TSS HMEC breast
14 chr15:78834000-78835000 Weak transcription Fetal Kidney kidney
15 chr15:78834000-78835000 Weak transcription Placenta Amnion Placenta Amnion
16 chr15:78834000-78835000 Weak transcription Right Ventricle heart
17 chr15:78834000-78835000 Weak transcription Sigmoid Colon Sigmoid Colon
18 chr15:78834000-78835000 Transcr. at gene 5' and 3' A549 lung
19 chr15:78834000-78835600 Weak transcription Aorta Aorta
20 chr15:78834000-78837600 Weak transcription ES-WA7 Cell Line embryonic stem cell
21 chr15:78834000-78838000 Weak transcription Small Intestine intestine
22 chr15:78834200-78834800 Weak transcription H9 Cell Line embryonic stem cell
23 chr15:78834200-78834800 Genic enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
24 chr15:78834200-78834800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
25 chr15:78834200-78834800 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
26 chr15:78834200-78834800 Enhancers Primary mononuclear cells fromperipheralblood Blood
27 chr15:78834200-78834800 Enhancers Adipose Nuclei Adipose
28 chr15:78834200-78834800 Enhancers Brain Angular Gyrus brain
29 chr15:78834200-78834800 Enhancers Brain Cingulate Gyrus brain
30 chr15:78834200-78834800 Weak transcription Fetal Intestine Large intestine
31 chr15:78834200-78835000 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
32 chr15:78834200-78835000 Enhancers Primary monocytes fromperipheralblood blood
33 chr15:78834200-78835000 Genic enhancers Primary B cells from peripheral blood blood
34 chr15:78834200-78835000 Enhancers Fetal Brain Female brain
35 chr15:78834200-78835000 Genic enhancers Fetal Lung lung
36 chr15:78834200-78835000 Weak transcription Ovary ovary
37 chr15:78834200-78835200 Enhancers Breast Myoepithelial Primary Cells Breast
38 chr15:78834200-78835200 Enhancers Primary T helper naive cells fromperipheralblood blood
39 chr15:78834200-78835200 Enhancers Fetal Heart heart
40 chr15:78834200-78835400 Weak transcription Fetal Intestine Small intestine
41 chr15:78834200-78835600 Enhancers Primary T killer memory cells from peripheral blood blood
42 chr15:78834200-78835600 Genic enhancers Skeletal Muscle Female skeletal muscle
43 chr15:78834200-78835800 Genic enhancers Primary Natural Killer cells fromperipheralblood blood
44 chr15:78834200-78835800 Genic enhancers Foreskin Melanocyte Primary Cells skin03 Skin
45 chr15:78834200-78837400 Weak transcription Brain Inferior Temporal Lobe brain
46 chr15:78834200-78841200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
47 chr15:78834200-78843400 Strong transcription iPS-18 Cell Line embryonic stem cell
48 chr15:78834200-78843400 Strong transcription Placenta Placenta
49 chr15:78834200-78845000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
50 chr15:78834400-78834800 Transcr. at gene 5' and 3' Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow

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