The 2.0 version of rSNPBase

Variant report

Variant rs2305584
Chromosome Location chr2:182374553-182374554
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:56 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:182324400-182410400 Weak transcription NHLF lung
2 chr2:182330000-182390200 Weak transcription Rectal Mucosa Donor 31 rectum
3 chr2:182331400-182382200 Weak transcription HMEC breast
4 chr2:182334600-182381400 Weak transcription Fetal Muscle Leg muscle
5 chr2:182335000-182405800 Strong transcription Primary monocytes fromperipheralblood blood
6 chr2:182336800-182382800 Weak transcription Small Intestine intestine
7 chr2:182338200-182378400 Strong transcription Primary T cells fromperipheralblood blood
8 chr2:182338200-182383400 Strong transcription Primary hematopoietic stem cells short term culture blood
9 chr2:182338200-182399400 Weak transcription Colonic Mucosa Colon
10 chr2:182338200-182406800 Strong transcription Fetal Thymus thymus
11 chr2:182338200-182406800 Weak transcription Spleen Spleen
12 chr2:182338400-182382200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
13 chr2:182338600-182405600 Strong transcription Primary B cells from peripheral blood blood
14 chr2:182339000-182381000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
15 chr2:182339200-182380600 Strong transcription Dnd41 blood
16 chr2:182339400-182405600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
17 chr2:182346000-182378600 Weak transcription Lung lung
18 chr2:182347200-182399800 Weak transcription Rectal Smooth Muscle rectum
19 chr2:182348200-182377400 Weak transcription NH-A brain
20 chr2:182349600-182405800 Strong transcription Monocytes-CD14+_RO01746 blood
21 chr2:182350400-182384600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
22 chr2:182353800-182404200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
23 chr2:182355200-182383000 Strong transcription GM12878-XiMat blood
24 chr2:182356000-182406800 Strong transcription Primary B cells from cord blood blood
25 chr2:182356200-182379600 Strong transcription Primary T helper cells fromperipheralblood blood
26 chr2:182357000-182377800 Strong transcription Primary T helper cells PMA-I stimulated --
27 chr2:182358200-182405800 Strong transcription Primary hematopoietic stem cells blood
28 chr2:182359600-182391800 Weak transcription Adipose Nuclei Adipose
29 chr2:182361000-182376600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
30 chr2:182361800-182398000 Weak transcription Fetal Intestine Small intestine
31 chr2:182362200-182375000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
32 chr2:182362400-182380400 Strong transcription Primary T regulatory cells fromperipheralblood blood
33 chr2:182364000-182399200 Weak transcription HSMM muscle
34 chr2:182364200-182376600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
35 chr2:182364200-182376800 Weak transcription Muscle Satellite Cultured Cells --
36 chr2:182366200-182390200 Weak transcription Sigmoid Colon Sigmoid Colon
37 chr2:182366400-182375000 Weak transcription Rectal Mucosa Donor 29 rectum
38 chr2:182366400-182376200 Weak transcription NHDF-Ad bronchial
39 chr2:182366400-182399600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
40 chr2:182366600-182377600 Weak transcription Duodenum Mucosa Duodenum
41 chr2:182366800-182375000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
42 chr2:182366800-182375000 Weak transcription Primary T helper naive cells from peripheral blood blood
43 chr2:182367200-182377800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
44 chr2:182369600-182375200 Weak transcription iPS-18 Cell Line embryonic stem cell
45 chr2:182370800-182374800 Weak transcription Primary T killer naive cells fromperipheralblood blood
46 chr2:182370800-182375600 Weak transcription Thymus Thymus
47 chr2:182371200-182375000 Weak transcription Primary T killer memory cells from peripheral blood blood
48 chr2:182371600-182379600 Strong transcription Primary T cells from cord blood blood
49 chr2:182371800-182376400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
50 chr2:182372400-182375000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood

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Last update: Aug 31, 2015