Variant report

Variant rs233060
Chromosome Location chr1:85798943-85798944
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:43 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:85790600-85800000 Enhancers HUVEC blood vessel
2 chr1:85792200-85806000 Weak transcription Fetal Kidney kidney
3 chr1:85796200-85799800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
4 chr1:85796600-85799600 Enhancers Osteobl bone
5 chr1:85796600-85801800 Weak transcription Gastric stomach
6 chr1:85796600-85804000 Weak transcription ES-WA7 Cell Line embryonic stem cell
7 chr1:85796600-85809400 Weak transcription Stomach Mucosa stomach
8 chr1:85796800-85799600 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
9 chr1:85796800-85804200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
10 chr1:85796800-85805400 Weak transcription Aorta Aorta
11 chr1:85796800-85805400 Weak transcription HepG2 liver
12 chr1:85796800-85806400 Weak transcription Small Intestine intestine
13 chr1:85796800-85809600 Weak transcription Rectal Mucosa Donor 31 rectum
14 chr1:85797000-85800600 Weak transcription HMEC breast
15 chr1:85797000-85805000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
16 chr1:85797400-85799000 Enhancers Fetal Muscle Trunk muscle
17 chr1:85797400-85800200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
18 chr1:85797600-85799200 Genic enhancers HSMM muscle
19 chr1:85797600-85800400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
20 chr1:85797600-85803600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
21 chr1:85797800-85799200 Strong transcription Fetal Intestine Small intestine
22 chr1:85798000-85799000 Genic enhancers Foreskin Fibroblast Primary Cells skin02 Skin
23 chr1:85798000-85799200 Genic enhancers Muscle Satellite Cultured Cells --
24 chr1:85798200-85799000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
25 chr1:85798200-85799000 ZNF genes & repeats Fetal Stomach stomach
26 chr1:85798200-85799600 Weak transcription Cortex derived primary cultured neurospheres brain
27 chr1:85798200-85800400 Weak transcription NH-A brain
28 chr1:85798400-85803400 Weak transcription Hela-S3 cervix
29 chr1:85798400-85804200 Weak transcription Right Ventricle heart
30 chr1:85798400-85806200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
31 chr1:85798600-85799000 ZNF genes & repeats Fetal Intestine Large intestine
32 chr1:85798600-85800200 Weak transcription ES-I3 Cell Line embryonic stem cell
33 chr1:85798600-85800200 Weak transcription HSMMtube muscle
34 chr1:85798800-85799000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
35 chr1:85798800-85799200 Weak transcription Lung lung
36 chr1:85798800-85799200 Weak transcription Pancreas Pancrea
37 chr1:85798800-85799600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
38 chr1:85798800-85800200 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
39 chr1:85798800-85800600 ZNF genes & repeats Primary B cells from peripheral blood blood
40 chr1:85798800-85808400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
41 chr1:85798800-85808400 Weak transcription Ovary ovary
42 chr1:85798800-85824800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
43 chr1:85798800-85824800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived

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