The 2.0 version of rSNPBase

Variant report

Variant rs233063
Chromosome Location chr1:85801874-85801875
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:39 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:85792200-85806000 Weak transcription Fetal Kidney kidney
2 chr1:85796600-85804000 Weak transcription ES-WA7 Cell Line embryonic stem cell
3 chr1:85796600-85809400 Weak transcription Stomach Mucosa stomach
4 chr1:85796800-85804200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
5 chr1:85796800-85805400 Weak transcription Aorta Aorta
6 chr1:85796800-85805400 Weak transcription HepG2 liver
7 chr1:85796800-85806400 Weak transcription Small Intestine intestine
8 chr1:85796800-85809600 Weak transcription Rectal Mucosa Donor 31 rectum
9 chr1:85797000-85805000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
10 chr1:85797600-85803600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
11 chr1:85798400-85803400 Weak transcription Hela-S3 cervix
12 chr1:85798400-85804200 Weak transcription Right Ventricle heart
13 chr1:85798400-85806200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
14 chr1:85798800-85808400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
15 chr1:85798800-85808400 Weak transcription Ovary ovary
16 chr1:85798800-85824800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
17 chr1:85798800-85824800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
18 chr1:85799000-85813600 Weak transcription Fetal Intestine Large intestine
19 chr1:85800200-85802000 Enhancers HUVEC blood vessel
20 chr1:85800200-85805600 Weak transcription Cortex derived primary cultured neurospheres brain
21 chr1:85800200-85805800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
22 chr1:85800400-85805000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
23 chr1:85800400-85805400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
24 chr1:85800400-85808800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
25 chr1:85800400-85815000 Weak transcription Fetal Intestine Small intestine
26 chr1:85800800-85802000 Enhancers Osteobl bone
27 chr1:85800800-85802600 Weak transcription HSMM muscle
28 chr1:85800800-85803600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
29 chr1:85800800-85803600 Weak transcription Primary hematopoietic stem cells short term culture blood
30 chr1:85800800-85803600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
31 chr1:85800800-85807600 Weak transcription HSMMtube muscle
32 chr1:85801000-85803800 Weak transcription NHLF lung
33 chr1:85801000-85804400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
34 chr1:85801000-85804800 Weak transcription HMEC breast
35 chr1:85801200-85803400 Weak transcription NHDF-Ad bronchial
36 chr1:85801200-85803600 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
37 chr1:85801400-85804000 Weak transcription NH-A brain
38 chr1:85801600-85804000 Weak transcription Muscle Satellite Cultured Cells --
39 chr1:85801600-85804400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin

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Last update: Aug 31, 2015