The 2.0 version of rSNPBase

Variant report

Variant rs233064
Chromosome Location chr1:85803628-85803629
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:44 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:85792200-85806000 Weak transcription Fetal Kidney kidney
2 chr1:85796600-85804000 Weak transcription ES-WA7 Cell Line embryonic stem cell
3 chr1:85796600-85809400 Weak transcription Stomach Mucosa stomach
4 chr1:85796800-85804200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
5 chr1:85796800-85805400 Weak transcription Aorta Aorta
6 chr1:85796800-85805400 Weak transcription HepG2 liver
7 chr1:85796800-85806400 Weak transcription Small Intestine intestine
8 chr1:85796800-85809600 Weak transcription Rectal Mucosa Donor 31 rectum
9 chr1:85797000-85805000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
10 chr1:85798400-85804200 Weak transcription Right Ventricle heart
11 chr1:85798400-85806200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
12 chr1:85798800-85808400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
13 chr1:85798800-85808400 Weak transcription Ovary ovary
14 chr1:85798800-85824800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
15 chr1:85798800-85824800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
16 chr1:85799000-85813600 Weak transcription Fetal Intestine Large intestine
17 chr1:85800200-85805600 Weak transcription Cortex derived primary cultured neurospheres brain
18 chr1:85800200-85805800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
19 chr1:85800400-85805000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
20 chr1:85800400-85805400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
21 chr1:85800400-85808800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
22 chr1:85800400-85815000 Weak transcription Fetal Intestine Small intestine
23 chr1:85800800-85807600 Weak transcription HSMMtube muscle
24 chr1:85801000-85803800 Weak transcription NHLF lung
25 chr1:85801000-85804400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
26 chr1:85801000-85804800 Weak transcription HMEC breast
27 chr1:85801400-85804000 Weak transcription NH-A brain
28 chr1:85801600-85804000 Weak transcription Muscle Satellite Cultured Cells --
29 chr1:85801600-85804400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
30 chr1:85802800-85804200 Strong transcription HSMM muscle
31 chr1:85803400-85803800 Strong transcription NHDF-Ad bronchial
32 chr1:85803400-85807000 Enhancers Hela-S3 cervix
33 chr1:85803600-85803800 Genic enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
34 chr1:85803600-85803800 Enhancers Colon Smooth Muscle Colon
35 chr1:85803600-85804000 Enhancers Primary hematopoietic stem cells short term culture blood
36 chr1:85803600-85804200 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
37 chr1:85803600-85804200 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
38 chr1:85803600-85804200 Weak transcription Pancreas Pancrea
39 chr1:85803600-85804400 Enhancers Psoas Muscle Psoas
40 chr1:85803600-85805400 Enhancers Skeletal Muscle Male skeletal muscle
41 chr1:85803600-85806800 Enhancers ES-I3 Cell Line embryonic stem cell
42 chr1:85803600-85807200 Genic enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
43 chr1:85803600-85807800 Genic enhancers Osteobl bone
44 chr1:85803600-85808600 Enhancers HUVEC blood vessel

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015