Variant report

Variant	rs2332166
Chromosome Location	chr14:70225364-70225365
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 18 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:16)

rs_ID	r²[population]
rs10130174	0.91[YRI][hapmap];0.85[AFR][1000 genomes]
rs10130926	0.96[YRI][hapmap];0.83[AFR][1000 genomes]
rs10134553	1.00[CEU][hapmap];0.96[YRI][hapmap];0.89[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs10151549	1.00[EUR][1000 genomes]
rs11628646	1.00[YRI][hapmap];0.84[AFR][1000 genomes]
rs12431918	1.00[YRI][hapmap];0.88[AFR][1000 genomes]
rs17107278	1.00[CEU][hapmap];1.00[YRI][hapmap];0.90[AFR][1000 genomes];0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17107282	1.00[YRI][hapmap];0.87[AFR][1000 genomes]
rs28488181	0.85[AFR][1000 genomes]
rs28595072	0.83[AFR][1000 genomes]
rs28607349	1.00[EUR][1000 genomes]
rs56203918	0.81[AMR][1000 genomes]
rs73283334	0.81[AMR][1000 genomes]
rs8014019	0.90[AFR][1000 genomes];0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs8018389	0.84[AFR][1000 genomes]
rs9323529	1.00[CEU][hapmap];1.00[YRI][hapmap];0.90[AFR][1000 genomes];0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv456336	chr14:70081956-70574149	Enhancers Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Strong transcription Active TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	75 gene(s)	inside rSNPs	diseases
2	nsv565007	chr14:70081956-70574149	Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Enhancers Strong transcription Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	75 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:70221000-70227200	Weak transcription	Primary monocytes fromperipheralblood	blood
2	chr14:70222400-70233000	Weak transcription	Primary B cells from peripheral blood	blood
3	chr14:70222600-70227400	Weak transcription	Primary hematopoietic stem cells short term culture	blood
4	chr14:70223000-70228800	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
5	chr14:70223200-70228400	Weak transcription	Primary T cells from cord blood	blood
6	chr14:70223200-70232400	Weak transcription	Primary T killer memory cells from peripheral blood	blood
7	chr14:70223400-70228800	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
8	chr14:70223400-70232400	Weak transcription	Primary T helper cells fromperipheralblood	blood
9	chr14:70224400-70226000	Enhancers	HepG2	liver
10	chr14:70224400-70226000	Enhancers	K562	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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