Variant report

Variant rs2358125
Chromosome Location chr2:11920199-11920200
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:11906400-11924600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr2:11906600-11924800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr2:11906800-11924600 Weak transcription Cortex derived primary cultured neurospheres brain
4 chr2:11912600-11920400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
5 chr2:11914800-11920200 Weak transcription Fetal Lung lung
6 chr2:11915000-11923200 Weak transcription Pancreatic Islets Pancreatic Islet
7 chr2:11915800-11921000 Weak transcription iPS-18 Cell Line embryonic stem cell
8 chr2:11915800-11921600 Weak transcription H9 Cell Line embryonic stem cell
9 chr2:11915800-11922000 Weak transcription Fetal Kidney kidney
10 chr2:11916800-11961200 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
11 chr2:11917200-11921000 Genic enhancers Skeletal Muscle Male skeletal muscle
12 chr2:11917400-11920400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
13 chr2:11917400-11922800 Weak transcription HSMM muscle
14 chr2:11918000-11922400 Weak transcription Placenta Amnion Placenta Amnion
15 chr2:11918400-11920400 Weak transcription Gastric stomach
16 chr2:11918600-11920200 Weak transcription Lung lung
17 chr2:11918600-11920400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
18 chr2:11918600-11920400 Weak transcription Esophagus oesophagus
19 chr2:11918600-11923200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
20 chr2:11919400-11920200 Weak transcription Fetal Intestine Large intestine
21 chr2:11919400-11920400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
22 chr2:11919400-11920400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
23 chr2:11919400-11920400 Weak transcription Brain Substantia Nigra brain
24 chr2:11919400-11920400 Weak transcription Duodenum Smooth Muscle Duodenum
25 chr2:11919400-11920400 Weak transcription Rectal Smooth Muscle rectum
26 chr2:11919400-11920400 Weak transcription Right Ventricle heart
27 chr2:11919400-11920600 Weak transcription Spleen Spleen
28 chr2:11919400-11920800 Weak transcription NH-A brain
29 chr2:11919400-11921200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
30 chr2:11919400-11924600 Strong transcription Fetal Stomach stomach
31 chr2:11919400-11924800 Weak transcription iPS-20b Cell Line embryonic stem cell
32 chr2:11919400-11925000 Weak transcription H1 Cell Line embryonic stem cell
33 chr2:11919400-11927000 Weak transcription Fetal Heart heart
34 chr2:11919400-11940400 Strong transcription Primary mononuclear cells fromperipheralblood Blood
35 chr2:11919400-11943400 Weak transcription ES-WA7 Cell Line embryonic stem cell
36 chr2:11919400-11961800 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
37 chr2:11919600-11920200 Weak transcription Adipose Nuclei Adipose
38 chr2:11919600-11920400 Weak transcription Colonic Mucosa Colon
39 chr2:11919600-11920400 Weak transcription Hela-S3 cervix
40 chr2:11919600-11921200 Strong transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
41 chr2:11919600-11921600 Weak transcription Brain Germinal Matrix brain
42 chr2:11919600-11922000 Weak transcription Fetal Brain Male brain
43 chr2:11919600-11923800 Strong transcription Primary hematopoietic stem cells blood
44 chr2:11919600-11924600 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
45 chr2:11919600-11924600 Strong transcription NHLF lung
46 chr2:11919600-11924800 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
47 chr2:11919600-11925000 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
48 chr2:11919600-11925000 Strong transcription Primary B cells from cord blood blood
49 chr2:11919600-11930400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
50 chr2:11919600-11940800 Strong transcription Left Ventricle heart

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