Variant report

Variant rs2361089
Chromosome Location chr9:580868-580869
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:30 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:549800-593800 Weak transcription Lung lung
2 chr9:572000-589400 Weak transcription Aorta Aorta
3 chr9:572200-589800 Weak transcription Rectal Mucosa Donor 31 rectum
4 chr9:574200-581400 Weak transcription ES-I3 Cell Line embryonic stem cell
5 chr9:574200-582200 Weak transcription Fetal Lung lung
6 chr9:574400-581200 Weak transcription Spleen Spleen
7 chr9:574400-589000 Weak transcription Brain Substantia Nigra brain
8 chr9:574600-581800 Weak transcription NHEK skin
9 chr9:574600-582800 Weak transcription Placenta Amnion Placenta Amnion
10 chr9:574600-584600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
11 chr9:574600-589400 Weak transcription HMEC breast
12 chr9:575200-589200 Weak transcription Right Ventricle heart
13 chr9:575400-587400 Weak transcription Brain Inferior Temporal Lobe brain
14 chr9:576000-581800 Weak transcription Left Ventricle heart
15 chr9:576600-581800 Weak transcription Gastric stomach
16 chr9:576600-581800 Weak transcription Pancreas Pancrea
17 chr9:576600-581800 Weak transcription Right Atrium heart
18 chr9:578800-581600 Weak transcription A549 lung
19 chr9:579600-581400 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
20 chr9:579600-582200 ZNF genes & repeats ES-UCSF4 Cell Line embryonic stem cell
21 chr9:579800-581400 Strong transcription Breast Myoepithelial Primary Cells Breast
22 chr9:579800-589200 Weak transcription Brain Anterior Caudate brain
23 chr9:580200-581400 ZNF genes & repeats Fetal Intestine Small intestine
24 chr9:580200-581600 Weak transcription Fetal Heart heart
25 chr9:580600-581400 ZNF genes & repeats H1 Cell Line embryonic stem cell
26 chr9:580600-581400 ZNF genes & repeats H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
27 chr9:580600-581400 ZNF genes & repeats Fetal Intestine Large intestine
28 chr9:580800-581200 ZNF genes & repeats Fetal Stomach stomach
29 chr9:580800-582000 ZNF genes & repeats iPS DF 19.11 Cell Line embryonic stem cell
30 chr9:580800-582000 Genic enhancers Foreskin Keratinocyte Primary Cells skin03 Skin

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