Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr3:81497703..81499898-chr3:81516331..81519051,2	K562	blood:
2	chr3:81497118..81498955-chr3:81501852..81504094,2	K562	blood:

rSNPs within LD-proxies of this variant (count:37)

rs_ID	r²[population]
rs11920473	0.88[JPT][hapmap];1.00[YRI][hapmap]
rs1492886	1.00[JPT][hapmap];1.00[YRI][hapmap]
rs1675838	0.82[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs188008	0.85[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2029660	1.00[JPT][hapmap]
rs2126221	0.93[AFR][1000 genomes];0.81[EUR][1000 genomes]
rs2131369	0.90[JPT][hapmap]
rs2372908	1.00[JPT][hapmap];1.00[YRI][hapmap]
rs276114	0.85[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs276122	0.85[ASN][1000 genomes]
rs276125	0.83[AMR][1000 genomes];0.85[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs276128	0.86[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3772914	1.00[JPT][hapmap]
rs3821554	1.00[JPT][hapmap]
rs4362742	0.89[JPT][hapmap]
rs6548768	0.90[JPT][hapmap];1.00[YRI][hapmap]
rs6548769	1.00[JPT][hapmap]
rs6785616	1.00[JPT][hapmap]
rs6785735	1.00[JPT][hapmap]
rs6792379	1.00[JPT][hapmap]
rs6800135	1.00[JPT][hapmap]
rs7621067	0.89[JPT][hapmap]
rs820268	0.90[JPT][hapmap];1.00[YRI][hapmap]
rs820269	0.90[JPT][hapmap]
rs820270	0.90[JPT][hapmap]
rs820273	1.00[JPT][hapmap]
rs843940	1.00[JPT][hapmap]
rs846	0.86[JPT][hapmap]
rs9309872	1.00[JPT][hapmap]
rs9309875	0.90[JPT][hapmap]
rs9681347	1.00[JPT][hapmap]
rs9814053	1.00[JPT][hapmap];1.00[YRI][hapmap]
rs9819406	1.00[JPT][hapmap]
rs9835378	0.90[JPT][hapmap]
rs9846154	1.00[JPT][hapmap]
rs9869348	1.00[JPT][hapmap]
rs9871153	1.00[JPT][hapmap];1.00[YRI][hapmap]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv934018	chr3:81413060-81655338	Weak transcription Strong transcription Enhancers Active TSS ZNF genes & repeats Genic enhancers Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
2	nsv933756	chr3:81413060-81754738	Weak transcription Strong transcription Enhancers Genic enhancers Active TSS Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
3	nsv1003217	chr3:81435044-81752521	Weak transcription Strong transcription ZNF genes & repeats Enhancers Genic enhancers Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:81486800-81503200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
2	chr3:81492000-81499600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
3	chr3:81492800-81500400	Weak transcription	Breast Myoepithelial Primary Cells	Breast
4	chr3:81493600-81503000	Weak transcription	Aorta	Aorta
5	chr3:81495000-81500800	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
6	chr3:81495600-81499600	Enhancers	Adipose Nuclei	Adipose
7	chr3:81496800-81500200	Weak transcription	Muscle Satellite Cultured Cells	--
8	chr3:81497200-81500400	Weak transcription	Fetal Heart	heart
9	chr3:81497600-81498800	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
10	chr3:81497800-81500000	Weak transcription	Osteobl	bone
11	chr3:81498200-81501600	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
12	chr3:81498400-81499200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
13	chr3:81498400-81502000	Enhancers	NHDF-Ad	bronchial

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