Variant report

Variant	rs2385248
Chromosome Location	chr7:104267590-104267591
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 41 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:41)

rs_ID	r²[population]
rs10225413	0.91[YRI][hapmap]
rs10246540	1.00[CHB][hapmap];0.89[JPT][hapmap]
rs10272959	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs11761636	0.90[CHB][hapmap];1.00[JPT][hapmap];0.86[ASN][1000 genomes]
rs11773248	0.92[CHB][hapmap];0.89[JPT][hapmap]
rs11977439	0.84[CHB][hapmap];0.89[JPT][hapmap]
rs11983223	0.84[CHB][hapmap];1.00[JPT][hapmap]
rs1465342	0.92[CHB][hapmap];1.00[JPT][hapmap];0.86[ASN][1000 genomes]
rs1541593	0.91[YRI][hapmap]
rs16870065	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs17139105	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs17139109	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs17139166	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs17139722	0.92[CHB][hapmap];1.00[JPT][hapmap];0.86[ASN][1000 genomes]
rs17139736	0.90[CHB][hapmap];1.00[JPT][hapmap]
rs1861611	0.91[YRI][hapmap]
rs1990705	0.86[YRI][hapmap]
rs2193198	0.92[CHB][hapmap];1.00[JPT][hapmap]
rs2193200	0.92[CHB][hapmap];1.00[JPT][hapmap]
rs2193205	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs2193212	1.00[CHB][hapmap];0.88[JPT][hapmap];0.86[ASN][1000 genomes]
rs2193213	0.91[YRI][hapmap];0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs2193214	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs2216245	0.91[YRI][hapmap];0.93[AFR][1000 genomes]
rs2385245	0.83[YRI][hapmap]
rs2385247	0.84[CHB][hapmap];0.89[JPT][hapmap];0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2385254	0.92[CHB][hapmap];1.00[JPT][hapmap];0.86[ASN][1000 genomes]
rs3919550	1.00[CHB][hapmap];0.89[JPT][hapmap]
rs4131017	0.83[CHB][hapmap];1.00[JPT][hapmap]
rs4357228	0.83[CHB][hapmap];1.00[JPT][hapmap]
rs4612275	0.90[CHB][hapmap];1.00[JPT][hapmap]
rs4727603	0.89[YRI][hapmap]
rs4727607	0.91[YRI][hapmap];0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6944590	0.92[CHB][hapmap];1.00[JPT][hapmap];0.89[ASN][1000 genomes]
rs6948948	1.00[CHB][hapmap];0.89[JPT][hapmap]
rs6967399	1.00[CHB][hapmap];0.89[JPT][hapmap]
rs6969085	0.91[YRI][hapmap]
rs759533	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap]
rs7784639	0.81[CHB][hapmap];1.00[JPT][hapmap];0.89[ASN][1000 genomes]
rs7805947	1.00[CHB][hapmap];0.89[JPT][hapmap]
rs929661	1.00[CHB][hapmap];0.85[JPT][hapmap]

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:104265200-104268800	Enhancers	Brain Germinal Matrix	brain
2	chr7:104265600-104268800	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
3	chr7:104266800-104268400	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain

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