The 2.0 version of rSNPBase

Variant report

Variant rs2391139
Chromosome Location chr1:92727610-92727611
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:122 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:92705800-92729200 Weak transcription Brain Inferior Temporal Lobe brain
2 chr1:92707200-92764000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr1:92708200-92741200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
4 chr1:92709000-92737200 Weak transcription ES-I3 Cell Line embryonic stem cell
5 chr1:92709000-92762800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
6 chr1:92709400-92735800 Weak transcription Primary T killer memory cells from peripheral blood blood
7 chr1:92709600-92730800 Weak transcription Hela-S3 cervix
8 chr1:92710000-92737600 Weak transcription HSMM muscle
9 chr1:92710000-92745200 Weak transcription Brain Hippocampus Middle brain
10 chr1:92710200-92739400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
11 chr1:92710600-92753200 Weak transcription Small Intestine intestine
12 chr1:92710600-92762000 Weak transcription Fetal Brain Male brain
13 chr1:92710600-92763400 Weak transcription Brain Angular Gyrus brain
14 chr1:92710600-92764000 Weak transcription Gastric stomach
15 chr1:92711000-92763600 Weak transcription HSMMtube muscle
16 chr1:92711200-92738200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
17 chr1:92711200-92742800 Weak transcription NHLF lung
18 chr1:92711200-92761600 Weak transcription Skeletal Muscle Male skeletal muscle
19 chr1:92711200-92764000 Weak transcription Spleen Spleen
20 chr1:92713200-92728000 Weak transcription HUVEC blood vessel
21 chr1:92713800-92728000 Weak transcription HMEC breast
22 chr1:92715000-92731600 Weak transcription Primary T killer naive cells fromperipheralblood blood
23 chr1:92715600-92738200 Weak transcription K562 blood
24 chr1:92717400-92734800 Weak transcription Psoas Muscle Psoas
25 chr1:92718000-92738200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
26 chr1:92719400-92728200 Weak transcription Placenta Placenta
27 chr1:92719400-92745000 Weak transcription Esophagus oesophagus
28 chr1:92719400-92764000 Weak transcription Pancreas Pancrea
29 chr1:92719600-92730600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
30 chr1:92719600-92760800 Weak transcription Fetal Heart heart
31 chr1:92720000-92763800 Weak transcription Rectal Smooth Muscle rectum
32 chr1:92720200-92734400 Weak transcription Placenta Amnion Placenta Amnion
33 chr1:92720200-92737600 Weak transcription Brain Anterior Caudate brain
34 chr1:92720200-92739000 Weak transcription Aorta Aorta
35 chr1:92720400-92748400 Weak transcription Pancreatic Islets Pancreatic Islet
36 chr1:92721200-92728000 Weak transcription Duodenum Mucosa Duodenum
37 chr1:92721400-92731400 Weak transcription Fetal Kidney kidney
38 chr1:92721600-92742400 Weak transcription Cortex derived primary cultured neurospheres brain
39 chr1:92722400-92763400 Weak transcription iPS-15b Cell Line embryonic stem cell
40 chr1:92723000-92763800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
41 chr1:92724000-92729800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
42 chr1:92724000-92731000 Strong transcription Primary hematopoietic stem cells short term culture blood
43 chr1:92724000-92760600 Weak transcription Colon Smooth Muscle Colon
44 chr1:92724200-92727800 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
45 chr1:92724200-92728400 Strong transcription Fetal Lung lung
46 chr1:92724200-92728600 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
47 chr1:92724200-92729600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
48 chr1:92724200-92729800 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
49 chr1:92724200-92730200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
50 chr1:92724200-92731400 Strong transcription Fetal Thymus thymus

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Last update: Aug 31, 2015