The 2.0 version of rSNPBase

Variant report

Variant rs2391198
Chromosome Location chr1:93190954-93190955
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:41 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:93098400-93205400 Weak transcription NHLF lung
2 chr1:93123600-93213400 Weak transcription Gastric stomach
3 chr1:93155800-93213400 Weak transcription Lung lung
4 chr1:93161000-93197400 Weak transcription Primary B cells from cord blood blood
5 chr1:93161000-93197800 Weak transcription Sigmoid Colon Sigmoid Colon
6 chr1:93161000-93199000 Weak transcription Left Ventricle heart
7 chr1:93174400-93202000 Weak transcription Fetal Heart heart
8 chr1:93175800-93199400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
9 chr1:93177800-93197600 Weak transcription Fetal Adrenal Gland Adrenal Gland
10 chr1:93181800-93196600 Weak transcription HepG2 liver
11 chr1:93182600-93200000 Weak transcription Primary B cells from peripheral blood blood
12 chr1:93185400-93194200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
13 chr1:93186600-93205600 Weak transcription Ovary ovary
14 chr1:93186800-93197800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
15 chr1:93186800-93213400 Weak transcription K562 blood
16 chr1:93188400-93202000 Weak transcription Skeletal Muscle Male skeletal muscle
17 chr1:93188400-93205400 Weak transcription Small Intestine intestine
18 chr1:93188600-93192400 Weak transcription Fetal Kidney kidney
19 chr1:93188600-93199200 Weak transcription Rectal Mucosa Donor 29 rectum
20 chr1:93188600-93203800 Weak transcription HMEC breast
21 chr1:93188800-93191000 ZNF genes & repeats Fetal Intestine Small intestine
22 chr1:93188800-93201000 Weak transcription Stomach Smooth Muscle stomach
23 chr1:93189000-93197800 Weak transcription Fetal Muscle Trunk muscle
24 chr1:93189000-93203800 Weak transcription Hela-S3 cervix
25 chr1:93189000-93213400 Weak transcription Fetal Lung lung
26 chr1:93189200-93191000 Weak transcription Breast Myoepithelial Primary Cells Breast
27 chr1:93189400-93192800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
28 chr1:93189400-93204200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
29 chr1:93189400-93206000 Weak transcription Brain Anterior Caudate brain
30 chr1:93189800-93191000 Strong transcription Monocytes-CD14+_RO01746 blood
31 chr1:93189800-93199200 Weak transcription NH-A brain
32 chr1:93190000-93191000 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
33 chr1:93190000-93221800 Weak transcription Rectal Smooth Muscle rectum
34 chr1:93190200-93191200 Strong transcription Primary monocytes fromperipheralblood blood
35 chr1:93190200-93191200 Strong transcription Fetal Intestine Large intestine
36 chr1:93190200-93198000 Weak transcription Primary hematopoietic stem cells blood
37 chr1:93190200-93220000 Weak transcription Fetal Muscle Leg muscle
38 chr1:93190400-93198400 Weak transcription Fetal Stomach stomach
39 chr1:93190400-93199200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
40 chr1:93190600-93197000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
41 chr1:93190800-93197800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived

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Last update: Aug 31, 2015