The 2.0 version of rSNPBase

Variant report

Variant rs239196
Chromosome Location chr6:101132925-101132926
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:37 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:101093000-101145800 Weak transcription Fetal Thymus thymus
2 chr6:101100600-101149800 Weak transcription Primary T regulatory cells fromperipheralblood blood
3 chr6:101100800-101147600 Weak transcription Primary B cells from peripheral blood blood
4 chr6:101100800-101164600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
5 chr6:101103800-101143600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
6 chr6:101104000-101135000 Weak transcription Primary T helper cells PMA-I stimulated --
7 chr6:101110000-101147600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
8 chr6:101110400-101146800 Weak transcription Primary T cells from cord blood blood
9 chr6:101111200-101168200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
10 chr6:101111600-101168000 Weak transcription NHDF-Ad bronchial
11 chr6:101111800-101139800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
12 chr6:101111800-101147200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
13 chr6:101111800-101147200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
14 chr6:101111800-101168200 Weak transcription Osteobl bone
15 chr6:101112000-101161200 Weak transcription HMEC breast
16 chr6:101118600-101134000 Weak transcription Psoas Muscle Psoas
17 chr6:101118600-101168000 Weak transcription Duodenum Smooth Muscle Duodenum
18 chr6:101118800-101147400 Weak transcription GM12878-XiMat blood
19 chr6:101119000-101147000 Weak transcription Breast Myoepithelial Primary Cells Breast
20 chr6:101119200-101165600 Weak transcription NH-A brain
21 chr6:101119400-101181200 Weak transcription Left Ventricle heart
22 chr6:101119800-101133400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
23 chr6:101119800-101146800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
24 chr6:101119800-101146800 Weak transcription Primary B cells from cord blood blood
25 chr6:101120000-101146800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
26 chr6:101120000-101147000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
27 chr6:101120000-101148000 Weak transcription HSMMtube muscle
28 chr6:101121000-101137600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
29 chr6:101122000-101148000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
30 chr6:101124600-101146800 Weak transcription Dnd41 blood
31 chr6:101124800-101147400 Weak transcription Primary hematopoietic stem cells short term culture blood
32 chr6:101126200-101147000 Weak transcription Fetal Intestine Small intestine
33 chr6:101127400-101146800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
34 chr6:101128800-101168000 Weak transcription NHLF lung
35 chr6:101130600-101148000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
36 chr6:101131800-101134000 Enhancers Fetal Heart heart
37 chr6:101132600-101145000 Weak transcription HSMM muscle

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Last update: Aug 31, 2015