Variant report

Variant	rs239216
Chromosome Location	chr6:101147892-101147893
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 245 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:222)

rs_ID	r²[population]
rs10223467	0.84[EUR][1000 genomes]
rs1039030	0.89[EUR][1000 genomes]
rs1039031	0.80[AFR][1000 genomes];0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs1039032	0.80[AFR][1000 genomes];0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs1039033	0.95[ASN][1000 genomes]
rs10457077	0.89[EUR][1000 genomes]
rs10457844	0.91[AMR][1000 genomes];0.89[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10457849	0.87[AMR][1000 genomes];0.85[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1070990	0.89[AMR][1000 genomes];0.83[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs108422	0.83[ASN][1000 genomes]
rs10872622	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes];0.92[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10872623	0.81[ASN][1000 genomes]
rs10872628	0.91[AMR][1000 genomes];0.89[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10872634	0.89[AMR][1000 genomes];0.89[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs11155498	0.83[ASN][1000 genomes]
rs11155596	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11155606	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11155610	0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11155613	0.84[EUR][1000 genomes]
rs11155618	0.89[EUR][1000 genomes]
rs11155623	0.91[AMR][1000 genomes];0.87[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs11155635	0.89[EUR][1000 genomes]
rs11155636	0.89[AMR][1000 genomes];0.88[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs11155637	0.89[AMR][1000 genomes];0.88[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11155638	0.89[AMR][1000 genomes];0.88[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs11155653	0.89[AMR][1000 genomes];0.87[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11155659	0.89[AMR][1000 genomes];0.87[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11155666	0.89[AMR][1000 genomes];0.87[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs11155673	0.84[EUR][1000 genomes]
rs11752659	0.89[AMR][1000 genomes];0.86[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12174782	0.82[CHB][hapmap]
rs12174806	0.84[EUR][1000 genomes]
rs12175456	0.81[EUR][1000 genomes]
rs12189562	0.82[AMR][1000 genomes];0.80[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12190574	0.97[ASN][1000 genomes]
rs12193960	1.00[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12194255	0.92[EUR][1000 genomes]
rs12195369	0.88[AMR][1000 genomes];0.88[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12199888	0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12201852	0.80[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12202621	0.84[EUR][1000 genomes]
rs12206182	0.83[ASN][1000 genomes]
rs12206838	0.88[EUR][1000 genomes]
rs12206945	0.83[ASN][1000 genomes]
rs12207086	0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12209777	0.92[EUR][1000 genomes]
rs12209887	0.80[AFR][1000 genomes];0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs12210255	0.89[EUR][1000 genomes]
rs12210550	0.85[AMR][1000 genomes];0.87[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12212435	0.89[EUR][1000 genomes]
rs12212736	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12213201	0.89[EUR][1000 genomes]
rs12214151	0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12215909	0.83[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs12216199	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12216304	0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12660725	1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap]
rs12664626	0.89[EUR][1000 genomes]
rs13196803	0.91[AMR][1000 genomes];0.89[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs13208757	0.83[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs1336242	0.82[EUR][1000 genomes]
rs1336244	0.88[EUR][1000 genomes]
rs1336245	0.89[EUR][1000 genomes]
rs1414734	0.83[EUR][1000 genomes]
rs151572	0.90[AFR][1000 genomes];0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs151573	0.86[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs151637	0.87[AFR][1000 genomes];0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs151638	0.82[AMR][1000 genomes];0.89[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs151640	0.88[AMR][1000 genomes];0.89[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs180963	0.90[EUR][1000 genomes]
rs183566	0.92[EUR][1000 genomes]
rs1875400	0.83[ASN][1000 genomes]
rs1875401	0.82[ASN][1000 genomes]
rs2036052	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2050549	0.84[EUR][1000 genomes]
rs2132168	0.89[EUR][1000 genomes]
rs2132169	0.89[AMR][1000 genomes];0.89[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs239189	0.91[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs239190	0.93[AFR][1000 genomes];0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs239193	0.97[ASN][1000 genomes]
rs239194	0.99[ASN][1000 genomes]
rs239195	0.99[ASN][1000 genomes]
rs239197	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs239199	0.99[ASN][1000 genomes]
rs239201	0.93[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs239203	0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs239204	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs239206	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs239207	0.93[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs239208	0.92[EUR][1000 genomes]
rs239209	0.92[EUR][1000 genomes]
rs239211	0.80[AFR][1000 genomes];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs239212	0.81[AMR][1000 genomes];0.81[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs239215	0.92[EUR][1000 genomes]
rs239217	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs239218	0.89[EUR][1000 genomes]
rs239219	0.89[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs239221	0.90[AFR][1000 genomes];0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs239222	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs239223	0.90[AFR][1000 genomes];0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs239226	0.87[AFR][1000 genomes];0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs239227	0.87[AFR][1000 genomes];0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs239229	0.87[AFR][1000 genomes];0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs239230	0.87[AFR][1000 genomes];0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs239231	0.84[AFR][1000 genomes];0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs239232	0.87[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs239234	0.84[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs239235	0.84[AFR][1000 genomes];0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs239236	0.84[AMR][1000 genomes];0.90[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs239237	0.84[AFR][1000 genomes];0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs239238	0.86[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs239239	0.84[AFR][1000 genomes];0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs239242	0.86[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs239245	0.84[AFR][1000 genomes];0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs239246	0.84[AFR][1000 genomes];0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs239247	0.86[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs239248	0.84[AFR][1000 genomes];0.89[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs239249	0.85[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs240110	0.83[AMR][1000 genomes];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs240111	0.86[EUR][1000 genomes]
rs240112	0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs240115	0.85[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs240141	0.83[AFR][1000 genomes];0.85[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs240143	0.82[AFR][1000 genomes];0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs240145	0.81[AFR][1000 genomes];0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs240146	0.82[AFR][1000 genomes];0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs240147	0.81[AFR][1000 genomes];0.89[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs240148	0.81[AFR][1000 genomes];0.85[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs240150	0.85[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs240151	0.87[EUR][1000 genomes]
rs240152	0.81[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs240153	0.83[AFR][1000 genomes];0.85[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs240154	0.84[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs240156	0.82[AMR][1000 genomes];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs240164	0.81[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs35168784	0.90[AMR][1000 genomes];0.89[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs35967345	0.89[EUR][1000 genomes]
rs369125	0.91[AFR][1000 genomes];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs370757	0.99[ASN][1000 genomes]
rs3811078	0.83[EUR][1000 genomes]
rs395521	0.86[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs41288423	0.80[AFR][1000 genomes];0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs4461738	0.96[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap]
rs4463266	0.84[EUR][1000 genomes]
rs4571568	0.87[AMR][1000 genomes];0.87[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4839789	0.84[EUR][1000 genomes]
rs4839792	0.82[EUR][1000 genomes]
rs4840147	0.89[EUR][1000 genomes]
rs4840148	0.89[EUR][1000 genomes]
rs4840150	0.84[EUR][1000 genomes]
rs4840151	0.89[EUR][1000 genomes]
rs4840154	0.84[EUR][1000 genomes]
rs4840155	0.82[EUR][1000 genomes]
rs58266877	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs592436	0.81[CHB][hapmap]
rs62422675	0.82[ASN][1000 genomes]
rs6570922	0.91[AMR][1000 genomes];0.89[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6570930	0.89[EUR][1000 genomes]
rs664245	0.85[CHB][hapmap]
rs6904959	1.00[AFR][1000 genomes];0.91[AMR][1000 genomes];0.90[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs6905113	0.84[EUR][1000 genomes]
rs6905221	0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6907240	0.80[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6907444	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes];0.92[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs6909880	0.91[AMR][1000 genomes];0.89[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs6916468	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes];0.92[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs6919745	0.81[CHB][hapmap]
rs6922219	0.80[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs6925065	0.84[EUR][1000 genomes]
rs6925316	0.84[EUR][1000 genomes]
rs6925823	0.88[EUR][1000 genomes]
rs6925840	0.89[AMR][1000 genomes];0.87[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs6932158	0.83[EUR][1000 genomes]
rs6934256	0.88[CHB][hapmap]
rs6937520	0.81[ASN][1000 genomes]
rs6938440	0.80[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs705583	0.89[AMR][1000 genomes];0.83[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs705584	0.89[AMR][1000 genomes];0.83[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs705585	0.89[AMR][1000 genomes];0.83[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs705599	0.81[CHB][hapmap]
rs705605	0.82[CHB][hapmap]
rs705607	0.81[CHB][hapmap]
rs705608	0.82[CHB][hapmap]
rs7451736	0.89[EUR][1000 genomes]
rs7740783	0.81[EUR][1000 genomes]
rs7740826	0.81[AMR][1000 genomes];0.81[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7742011	0.83[EUR][1000 genomes]
rs7746947	0.89[EUR][1000 genomes]
rs7746961	0.84[EUR][1000 genomes]
rs7747014	0.89[AMR][1000 genomes];0.88[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7748644	0.92[EUR][1000 genomes]
rs7754085	0.82[EUR][1000 genomes]
rs7768210	0.81[EUR][1000 genomes]
rs846794	0.82[CHB][hapmap]
rs846797	0.85[CHB][hapmap]
rs846798	0.81[CHB][hapmap]
rs846800	0.89[AMR][1000 genomes];0.83[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs846803	0.89[AMR][1000 genomes];0.83[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs9322174	0.85[EUR][1000 genomes]
rs9322181	0.84[EUR][1000 genomes]
rs9322182	0.84[EUR][1000 genomes]
rs9322183	0.84[EUR][1000 genomes]
rs9322212	0.83[EUR][1000 genomes]
rs9322213	0.83[EUR][1000 genomes]
rs9377214	0.84[EUR][1000 genomes]
rs9386250	0.84[EUR][1000 genomes]
rs9386257	0.83[EUR][1000 genomes]
rs9390679	0.84[EUR][1000 genomes]
rs9390681	0.82[EUR][1000 genomes]
rs9390685	0.84[EUR][1000 genomes]
rs9399652	0.82[ASN][1000 genomes]
rs9399685	0.84[EUR][1000 genomes]
rs9399694	0.82[EUR][1000 genomes]
rs9404016	0.84[EUR][1000 genomes]
rs9404049	0.84[EUR][1000 genomes]
rs9404052	0.83[EUR][1000 genomes]
rs9404053	0.82[EUR][1000 genomes]
rs9404054	0.82[EUR][1000 genomes]
rs9485410	0.82[EUR][1000 genomes]
rs9498252	0.83[EUR][1000 genomes]
rs9498390	0.83[EUR][1000 genomes]
rs9498419	0.81[CHB][hapmap]

Variant overlapped rSNPs/rCNVs (count:23 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv949535	chr6:100740293-101469052	Strong transcription Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	16 gene(s)	inside rSNPs	diseases
2	nsv1028016	chr6:101001055-101158822	Strong transcription Weak transcription Enhancers Genic enhancers ZNF genes & repeats Flanking Active TSS Active TSS	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
3	nsv886445	chr6:101004751-101240763	Weak transcription Strong transcription ZNF genes & repeats Enhancers Flanking Active TSS Genic enhancers Active TSS	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
4	nsv886450	chr6:101018032-101168137	Strong transcription Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Active TSS Genic enhancers	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
5	nsv886451	chr6:101018032-101172328	Weak transcription ZNF genes & repeats Genic enhancers Strong transcription Enhancers Active TSS Flanking Active TSS	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
6	nsv886452	chr6:101018032-101192051	Strong transcription Weak transcription Enhancers ZNF genes & repeats Genic enhancers Active TSS Flanking Active TSS	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
7	nsv886453	chr6:101018032-101203051	Enhancers Weak transcription Strong transcription Flanking Active TSS ZNF genes & repeats Genic enhancers Active TSS	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
8	nsv463988	chr6:101036713-101158950	Strong transcription Weak transcription ZNF genes & repeats Genic enhancers Enhancers Flanking Active TSS Active TSS	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
9	nsv604266	chr6:101036713-101158950	ZNF genes & repeats Weak transcription Genic enhancers Enhancers Strong transcription Flanking Active TSS Active TSS	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
10	nsv886455	chr6:101049108-101203051	Strong transcription Weak transcription Enhancers ZNF genes & repeats Genic enhancers Active TSS Flanking Active TSS	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
11	nsv886456	chr6:101049108-101277926	Weak transcription Enhancers Strong transcription Genic enhancers ZNF genes & repeats Active TSS Flanking Active TSS	Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
12	nsv604270	chr6:101058886-101196080	Weak transcription Enhancers ZNF genes & repeats Strong transcription Active TSS Flanking Active TSS Genic enhancers	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
13	nsv604271	chr6:101072307-101158950	Enhancers Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Flanking Active TSS Active TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
14	nsv463991	chr6:101072307-101196080	Weak transcription Enhancers Strong transcription Flanking Active TSS ZNF genes & repeats Active TSS Genic enhancers	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
15	nsv604272	chr6:101072307-101196080	Weak transcription Enhancers Strong transcription ZNF genes & repeats Genic enhancers Active TSS Flanking Active TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
16	nsv463992	chr6:101072307-101197953	Weak transcription Strong transcription Flanking Active TSS Enhancers ZNF genes & repeats Genic enhancers Active TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
17	nsv604273	chr6:101072307-101197953	ZNF genes & repeats Weak transcription Enhancers Strong transcription Flanking Active TSS Genic enhancers Active TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
18	nsv604274	chr6:101078718-101196080	Weak transcription Strong transcription Genic enhancers Flanking Active TSS Enhancers ZNF genes & repeats Active TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
19	nsv1028583	chr6:101091434-101152631	Enhancers Strong transcription Weak transcription ZNF genes & repeats Genic enhancers Flanking Active TSS Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
20	nsv1015465	chr6:101091434-101157493	Enhancers Strong transcription Weak transcription Active TSS Genic enhancers ZNF genes & repeats Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
21	nsv1031817	chr6:101091995-101157493	Enhancers Weak transcription Strong transcription ZNF genes & repeats Flanking Active TSS Active TSS Genic enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
22	nsv521897	chr6:101123503-101158950	Weak transcription ZNF genes & repeats Strong transcription Enhancers Active TSS Flanking Active TSS Genic enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
23	nsv1020692	chr6:101136992-101426071	ZNF genes & repeats Strong transcription Weak transcription Enhancers Active TSS Flanking Active TSS Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:75 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:101100600-101149800	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
2	chr6:101100800-101164600	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
3	chr6:101111200-101168200	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
4	chr6:101111600-101168000	Weak transcription	NHDF-Ad	bronchial
5	chr6:101111800-101168200	Weak transcription	Osteobl	bone
6	chr6:101112000-101161200	Weak transcription	HMEC	breast
7	chr6:101118600-101168000	Weak transcription	Duodenum Smooth Muscle	Duodenum
8	chr6:101119200-101165600	Weak transcription	NH-A	brain
9	chr6:101119400-101181200	Weak transcription	Left Ventricle	heart
10	chr6:101120000-101148000	Weak transcription	HSMMtube	muscle
11	chr6:101122000-101148000	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
12	chr6:101128800-101168000	Weak transcription	NHLF	lung
13	chr6:101130600-101148000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
14	chr6:101133200-101149400	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
15	chr6:101134000-101149600	Weak transcription	Fetal Heart	heart
16	chr6:101137800-101148000	Weak transcription	Esophagus	oesophagus
17	chr6:101140200-101149800	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
18	chr6:101142200-101148000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
19	chr6:101142400-101189600	Weak transcription	Rectal Mucosa Donor 29	rectum
20	chr6:101143000-101149400	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
21	chr6:101143200-101148000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
22	chr6:101143800-101148000	Weak transcription	Aorta	Aorta
23	chr6:101143800-101148000	Weak transcription	Gastric	stomach
24	chr6:101144000-101149400	Weak transcription	K562	blood
25	chr6:101144400-101149800	Weak transcription	Rectal Mucosa Donor 31	rectum
26	chr6:101144600-101148000	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
27	chr6:101144600-101165200	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
28	chr6:101145000-101149400	Weak transcription	Muscle Satellite Cultured Cells	--
29	chr6:101145000-101168000	Weak transcription	Hela-S3	cervix
30	chr6:101145400-101148000	Weak transcription	HSMM	muscle
31	chr6:101145400-101175600	Weak transcription	Stomach Smooth Muscle	stomach
32	chr6:101145600-101168200	Weak transcription	Brain Substantia Nigra	brain
33	chr6:101145600-101169200	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
34	chr6:101145800-101151600	Weak transcription	Sigmoid Colon	Sigmoid Colon
35	chr6:101146000-101148000	Weak transcription	Monocytes-CD14+_RO01746	blood
36	chr6:101146000-101149800	Weak transcription	Adipose Nuclei	Adipose
37	chr6:101146600-101149200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
38	chr6:101146800-101148200	Strong transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
39	chr6:101146800-101148200	ZNF genes & repeats	Primary B cells from cord blood	blood
40	chr6:101146800-101148800	Strong transcription	Foreskin Fibroblast Primary Cells skin02	Skin
41	chr6:101146800-101150200	ZNF genes & repeats	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
42	chr6:101146800-101150400	Strong transcription	Primary T cells from cord blood	blood
43	chr6:101146800-101150400	ZNF genes & repeats	Dnd41	blood
44	chr6:101146800-101151400	ZNF genes & repeats	HUES6 Cell Line	embryonic stem cell
45	chr6:101147000-101148000	ZNF genes & repeats	Pancreatic Islets	Pancreatic Islet
46	chr6:101147000-101148200	ZNF genes & repeats	Ovary	ovary
47	chr6:101147000-101148400	Strong transcription	Liver	Liver
48	chr6:101147000-101148600	ZNF genes & repeats	Primary hematopoietic stem cells	blood
49	chr6:101147000-101150200	ZNF genes & repeats	Fetal Intestine Small	intestine
50	chr6:101147000-101150600	ZNF genes & repeats	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived

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